RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 TRPC3Q13507 836 aa23.36■■□□□ 1.33
SNF8-216ENST00000573795 USP39Q53GS9 565 aaKnown RBP23.36■■□□□ 1.33
SNF8-216ENST00000573795 FOXD4L5Q5VV16 416 aaPredicted RBP23.36■■□□□ 1.33
SNF8-216ENST00000573795 FAM35AQ86V20 835 aa23.36■■□□□ 1.33
SNF8-216ENST00000573795 PHTF2Q8N3S3 785 aa23.36■■□□□ 1.33
SNF8-216ENST00000573795 ALLCQ8N6M5 410 aa23.36■■□□□ 1.33
SNF8-216ENST00000573795 IL17RCQ8NAC3 791 aa23.36■■□□□ 1.33
SNF8-216ENST00000573795 SCAMP5Q8TAC9 235 aa23.36■■□□□ 1.33
SNF8-216ENST00000573795 FOXD4L4Q8WXT5 416 aaPredicted RBP23.36■■□□□ 1.33
SNF8-216ENST00000573795 SYAP1Q96A49 352 aaPredicted RBP23.36■■□□□ 1.33
SNF8-216ENST00000573795 PNKPQ96T60 521 aa23.36■■□□□ 1.33
SNF8-216ENST00000573795 SDCBP2Q9H190 292 aa23.36■■□□□ 1.33
SNF8-216ENST00000573795 IL37Q9NZH6 218 aa23.36■■□□□ 1.33
SNF8-216ENST00000573795 ANGPTL2Q9UKU9 493 aa23.36■■□□□ 1.33
SNF8-216ENST00000573795 MYO18AQ92614 2054 aaKnown RBP23.36■■□□□ 1.33
SNF8-216ENST00000573795 A0A0A0MRY4 1105 aa23.35■■□□□ 1.33
SNF8-216ENST00000573795 LRRIQ3A6PVS8 624 aaPredicted RBP23.35■■□□□ 1.33
SNF8-216ENST00000573795 SGK1O00141 431 aa23.35■■□□□ 1.33
SNF8-216ENST00000573795 KAT7O95251 611 aa23.35■■□□□ 1.33
SNF8-216ENST00000573795 KIR2DL1P43626 348 aaPredicted RBP23.35■■□□□ 1.33
SNF8-216ENST00000573795 CLDN10P78369 228 aa23.35■■□□□ 1.33
SNF8-216ENST00000573795 SHC2P98077 582 aa23.35■■□□□ 1.33
SNF8-216ENST00000573795 KNOP1Q1ED39 458 aaKnown RBP23.35■■□□□ 1.33
SNF8-216ENST00000573795 EMC10Q5UCC4 262 aa23.35■■□□□ 1.33
SNF8-216ENST00000573795 GRAMD1CQ8IYS0 662 aa23.35■■□□□ 1.33
SNF8-216ENST00000573795 TXNDC5Q8NBS9 432 aaKnown RBP23.35■■□□□ 1.33
SNF8-216ENST00000573795 OVCA2Q8WZ82 227 aa23.35■■□□□ 1.33
SNF8-216ENST00000573795 FBXO32Q969P5 355 aa23.35■■□□□ 1.33
SNF8-216ENST00000573795 BACH2Q9BYV9 841 aa23.35■■□□□ 1.33
SNF8-216ENST00000573795 CGNQ9P2M7 1197 aaKnown RBP23.35■■□□□ 1.33
SNF8-216ENST00000573795 PVALEFA0A1B0GWK0 134 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 KLRC4O43908 158 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 EXOC3O60645 756 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 RTN3O95197 1032 aaPredicted RBP23.34■■□□□ 1.33
SNF8-216ENST00000573795 VNN1O95497 513 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 ADH5P11766 374 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 SLC5A3P53794 718 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 KDSRQ06136 332 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 SNX30Q5VWJ9 437 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 SCARA5Q6ZMJ2 495 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 C11orf74Q86VG3 221 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 DDX42Q86XP3 938 aaKnown RBP eCLIP23.34■■□□□ 1.33
SNF8-216ENST00000573795 PDZD8Q8NEN9 1154 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 PARD3BQ8TEW8 1205 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 WBP2Q969T9 261 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 CCSER2Q9H7U1 834 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 ZDHHC4Q9NPG8 344 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 PCDHA7Q9UN72 937 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 ASPMQ8IZT6 3477 aa23.34■■□□□ 1.33
SNF8-216ENST00000573795 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.33■■□□□ 1.33
SNF8-216ENST00000573795 E2F8A0AVK6 867 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 FAM92AA1XBS5 289 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 C4orf47A7E2U8 309 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 PATE3B3GLJ2 98 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 ADAM23O75077 832 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 KLF8O95600 359 aaPredicted RBP23.33■■□□□ 1.33
SNF8-216ENST00000573795 ADH1CP00326 375 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 C4BPAP04003 597 aaKnown RBP23.33■■□□□ 1.33
SNF8-216ENST00000573795 ZDHHC11BP0C7U3 371 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 TIE1P35590 1138 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 AFMP43652 599 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 PGFP49763 221 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 ZNF699Q32M78 642 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 FOXD4L6Q3SYB3 417 aaPredicted RBP23.33■■□□□ 1.33
SNF8-216ENST00000573795 LY6G5CQ5SRR4 150 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 RESP18Q5W5W9 173 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 PSAPL1Q6NUJ1 521 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 FOXD4L3Q6VB84 417 aaPredicted RBP23.33■■□□□ 1.33
SNF8-216ENST00000573795 ETFBKMTQ8IXQ9 262 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 FUKQ8N0W3 1084 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 KIAA0895Q8NCT3 520 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 ZMIZ2Q8NF64 920 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 ARHGEF4Q9NR80 690 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 DMAC2Q9NW81 257 aa23.33■■□□□ 1.33
SNF8-216ENST00000573795 CHORDC1Q9UHD1 332 aaPredicted RBP23.33■■□□□ 1.33
SNF8-216ENST00000573795 CHD6Q8TD26 2715 aa23.32■■□□□ 1.32
SNF8-216ENST00000573795 PHACTR2O75167 634 aa23.32■■□□□ 1.32
SNF8-216ENST00000573795 APODP05090 189 aa23.32■■□□□ 1.32
SNF8-216ENST00000573795 P2RY2P41231 377 aa23.32■■□□□ 1.32
SNF8-216ENST00000573795 BIRC3Q13489 604 aa23.32■■□□□ 1.32
SNF8-216ENST00000573795 NCOA4Q13772 614 aa23.32■■□□□ 1.32
SNF8-216ENST00000573795 FRMD1Q8N878 549 aa23.32■■□□□ 1.32
SNF8-216ENST00000573795 RLN3Q8WXF3 142 aa23.32■■□□□ 1.32
SNF8-216ENST00000573795 CHAMP1Q96JM3 812 aa23.32■■□□□ 1.32
SNF8-216ENST00000573795 DMAP1Q9NPF5 467 aaPredicted RBP23.32■■□□□ 1.32
SNF8-216ENST00000573795 GMIPQ9P107 970 aa23.32■■□□□ 1.32
SNF8-216ENST00000573795 TBC1D14Q9P2M4 693 aa23.32■■□□□ 1.32
SNF8-216ENST00000573795 HMGXB4Q9UGU5 601 aa23.32■■□□□ 1.32
SNF8-216ENST00000573795 MYH10P35580 1976 aa23.32■■□□□ 1.32
SNF8-216ENST00000573795 GIPC1O14908 333 aa23.31■■□□□ 1.32
SNF8-216ENST00000573795 GRIA2P42262 883 aa23.31■■□□□ 1.32
SNF8-216ENST00000573795 DLG4P78352 724 aa23.31■■□□□ 1.32
SNF8-216ENST00000573795 STK4Q13043 487 aa23.31■■□□□ 1.32
SNF8-216ENST00000573795 HSF5Q4G112 596 aaPredicted RBP23.31■■□□□ 1.32
SNF8-216ENST00000573795 ZNF667Q5HYK9 610 aa23.31■■□□□ 1.32
SNF8-216ENST00000573795 HECTD3Q5T447 861 aa23.31■■□□□ 1.32
SNF8-216ENST00000573795 CYP2U1Q7Z449 544 aa23.31■■□□□ 1.32
SNF8-216ENST00000573795 TTC30AQ86WT1 665 aa23.31■■□□□ 1.32
SNF8-216ENST00000573795 SMARCD1Q96GM5 515 aa23.31■■□□□ 1.32
SNF8-216ENST00000573795 SMOQ99835 787 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms