RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 NLRP9Q7RTR0 991 aa11.71□□□□□ -0.54
RPAIN-212ENST00000573126 GPC2Q8N158 579 aa11.71□□□□□ -0.54
RPAIN-212ENST00000573126 AGGF1Q8N302 714 aaeCLIP11.71□□□□□ -0.54
RPAIN-212ENST00000573126 ZNF276Q8N554 614 aa11.71□□□□□ -0.54
RPAIN-212ENST00000573126 NLGN2Q8NFZ4 835 aa11.71□□□□□ -0.54
RPAIN-212ENST00000573126 SERAC1Q96JX3 654 aa11.71□□□□□ -0.54
RPAIN-212ENST00000573126 TACO1Q9BSH4 297 aaKnown RBP11.71□□□□□ -0.54
RPAIN-212ENST00000573126 CNPY3Q9BT09 278 aa11.71□□□□□ -0.54
RPAIN-212ENST00000573126 PHACTR1Q9C0D0 580 aa11.71□□□□□ -0.54
RPAIN-212ENST00000573126 ERAP1Q9NZ08 941 aa11.71□□□□□ -0.54
RPAIN-212ENST00000573126 FETUBQ9UGM5 382 aa11.71□□□□□ -0.54
RPAIN-212ENST00000573126 BRCA1P38398 1863 aaKnown RBP11.71□□□□□ -0.54
RPAIN-212ENST00000573126 MCM3APO60318 1980 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 A0A0G2JND7 137 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 A0A1B0GUA9 196 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 KCNN4O15554 427 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 LPXNO60711 386 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 FAM155BO75949 473 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 ZNF286BP0CG31 522 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 T-ENOLP0DO92 83 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 VDRP11473 427 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 ATP2A2P16615 1042 aaKnown RBP11.7□□□□□ -0.54
RPAIN-212ENST00000573126 STIP1P31948 543 aaKnown RBP11.7□□□□□ -0.54
RPAIN-212ENST00000573126 PCK1P35558 622 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 SLC26A2P50443 739 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 FAAP100Q0VG06 881 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 KRT81Q14533 505 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 MTDHQ86UE4 582 aaKnown RBP11.7□□□□□ -0.54
RPAIN-212ENST00000573126 CCDC125Q86Z20 511 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 CCDC33Q8N5R6 958 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 CFAP36Q96G28 342 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 FAM111AQ96PZ2 611 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 EBF2Q9HAK2 575 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 BARX2Q9UMQ3 279 aaPredicted RBP11.7□□□□□ -0.54
RPAIN-212ENST00000573126 DNAJC25-GNG10A0A024R161 153 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 DDNO94850 711 aaPredicted RBP11.7□□□□□ -0.54
RPAIN-212ENST00000573126 SLC25A27O95847 323 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 INHBAP08476 426 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 P4HA1P13674 534 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 ELF1P32519 619 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 KCNJ11Q14654 390 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 ACAP1Q15027 740 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 FYB2Q5VWT5 728 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 PRPF39Q86UA1 669 aaKnown RBP11.7□□□□□ -0.54
RPAIN-212ENST00000573126 LRRC6Q86X45 466 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 SULF1Q8IWU6 871 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 KIRREL3Q8IZU9 778 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 PLD5Q8N7P1 536 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 RFWD2Q8NHY2 731 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 CXCL16Q9H2A7 254 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 LRMDAQ9H2I8 198 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 CXorf56Q9H5V9 222 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 MANSC1Q9H8J5 431 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 SSU72Q9NP77 194 aaKnown RBP11.7□□□□□ -0.54
RPAIN-212ENST00000573126 CYLDQ9NQC7 956 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 FAM49BQ9NUQ9 324 aa11.7□□□□□ -0.54
RPAIN-212ENST00000573126 TM9SF1O15321 606 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 DIAPH2O60879 1101 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 APRTP07741 180 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 PFKMP08237 780 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 PTPRFP10586 1907 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 MCF2P10911 925 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 PYGBP11216 843 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 RBL1P28749 1068 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 ATICP31939 592 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 ZNF200P98182 395 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-212ENST00000573126 TTLL4Q14679 1199 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 PPP6R3Q5H9R7 873 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-212ENST00000573126 PMF1Q6P1K2 205 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 SCUBE3Q8IX30 993 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 CTAGE3PQ8IX95 158 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 NLRP7Q8WX94 980 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 TTC17Q96AE7 1141 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 SLC7A6OSQ96CW6 309 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-212ENST00000573126 RNF157Q96PX1 679 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 ASB7Q9H672 318 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 CYP3A43Q9HB55 503 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 USP29Q9HBJ7 922 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 RNF19AQ9NV58 838 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 NOP53Q9NZM5 478 aaKnown RBP11.69□□□□□ -0.54
RPAIN-212ENST00000573126 ZFP69BQ9UJL9 534 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 GINS2Q9Y248 185 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 C15orf41Q9Y2V0 281 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 TEX264Q9Y6I9 313 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 ENDOD1O94919 500 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 LGALS2P05162 132 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 NEFHP12036 1026 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 CCND1P24385 295 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 IL4RP24394 825 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 EPHB2P29323 1055 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 TFDP2Q14188 446 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 CA9Q16790 459 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 GOLGA7BQ2TAP0 167 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 CCDC14Q49A88 953 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 PPP1R26Q5T8A7 1209 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-212ENST00000573126 RAB3IPQ96QF0 476 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-212ENST00000573126 TRIM56Q9BRZ2 755 aaKnown RBP11.69□□□□□ -0.54
RPAIN-212ENST00000573126 NT5C1AQ9BXI3 368 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 TBC1D10AQ9BXI6 508 aa11.69□□□□□ -0.54
RPAIN-212ENST00000573126 B3GNT5Q9BYG0 378 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms