RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 ATXN2LQ8WWM7 1075 aaKnown RBP15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 ANP32BQ92688 251 aaKnown RBP15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 ACSF2Q96CM8 615 aaPredicted RBP15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 TCEAL4Q96EI5 215 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 TTLL2Q9BWV7 592 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 ULBP1Q9BZM6 244 aa15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 CHORDC1Q9UHD1 332 aaPredicted RBP15.28■□□□□ 0.04
NPLOC4-209ENST00000572760 NUP210Q8TEM1 1887 aaPredicted RBP15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 F11P03951 625 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 SP100P23497 879 aaPredicted RBP15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 MRE11P49959 708 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 KCNQ1P51787 676 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 CYP4F8P98187 520 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 PDCLQ13371 301 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 TEAD2Q15562 447 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 RAB41Q5JT25 222 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 PRSS36Q5K4E3 855 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 GPR158Q5T848 1215 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 NAA35Q5VZE5 725 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 E4F1Q66K89 784 aaPredicted RBP15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 GAREM2Q75VX8 874 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 OTOP3Q7RTS5 596 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 SHKBP1Q8TBC3 707 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 OVCA2Q8WZ82 227 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 MCRS1Q96EZ8 462 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 PPP1R13BQ96KQ4 1090 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 PHF7Q9BWX1 381 aaPredicted RBP15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 MIS12Q9H081 205 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 IL21Q9HBE4 155 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 TRPC7Q9HCX4 862 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 CYLDQ9NQC7 956 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 CNGB3Q9NQW8 809 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 TLR8Q9NR97 1041 aaKnown RBP15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 ABHD10Q9NUJ1 306 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 IL37Q9NZH6 218 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 GMIPQ9P107 970 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 SCML2Q9UQR0 700 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 NR2E1Q9Y466 385 aa15.27■□□□□ 0.04
NPLOC4-209ENST00000572760 FAM170AA1A519 330 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 FBXO21O94952 628 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 ZBED1O96006 694 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 CEBPBP17676 345 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 CDH5P33151 784 aaPredicted RBP15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 CCR2P41597 374 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 NSFP46459 744 aaKnown RBP15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 NOMO3P69849 1222 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 GSE1Q14687 1217 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 OR6B2Q6IFH4 312 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 CCDC186Q7Z3E2 898 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 ZNF571Q7Z3V5 609 aaPredicted RBP15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 ARHGAP18Q8N392 663 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 WDTC1Q8N5D0 677 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 TDRD5Q8NAT2 981 aaKnown RBP15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 CPA5Q8WXQ8 436 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 GOLGA1Q92805 767 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 FGF13Q92913 245 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 RPGRIP1Q96KN7 1286 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 SLC4A5Q9BY07 1137 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 DEF6Q9H4E7 631 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 CYTH4Q9UIA0 394 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 NAGPAQ9UK23 515 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 CDH7Q9ULB5 785 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 USP3Q9Y6I4 520 aa15.26■□□□□ 0.03
NPLOC4-209ENST00000572760 HELZP42694 1942 aaKnown RBP15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 FAM92AA1XBS5 289 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 E5RJQ4 531 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 SART1O43290 800 aaKnown RBP15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 MOSPD3O75425 235 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 CYP1A1P04798 512 aaPredicted RBP15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 RALAP11233 206 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 DDX6P26196 483 aaKnown RBP eCLIP15.25■□□□□ 0.039e-7■■■□□ 16.7
NPLOC4-209ENST00000572760 PSEN1P49768 467 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 CLEC16AQ2KHT3 1053 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 BTBD8Q5XKL5 378 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 PPP1R2P3Q6NXS1 205 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 TMEM110Q86TL2 294 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 MON1AQ86VX9 555 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 SCUBE3Q8IX30 993 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 MAB21L3Q8N8X9 362 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 C18orf8Q96DM3 657 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 ASB2Q96Q27 587 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 CPXM1Q96SM3 734 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 PCDHB18PQ96TA0 734 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 DNAJC7Q99615 494 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 NACA2Q9H009 215 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 TASP1Q9H6P5 420 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 IMPACTQ9P2X3 320 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 ZMYM5Q9UJ78 669 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 USTQ9Y2C2 406 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 ZFP37Q9Y6Q3 630 aaPredicted RBP15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 REV3LO60673 3130 aa15.25■□□□□ 0.03
NPLOC4-209ENST00000572760 NCANO14594 1321 aa15.24■□□□□ 0.03
NPLOC4-209ENST00000572760 A0A1W2PQH9 124 aa15.24■□□□□ 0.03
NPLOC4-209ENST00000572760 ZNF840PA6NDX5 716 aa15.24■□□□□ 0.03
NPLOC4-209ENST00000572760 TMCO5BA8MYB1 307 aa15.24■□□□□ 0.03
NPLOC4-209ENST00000572760 HNRNPH3P31942 346 aaKnown RBP15.24■□□□□ 0.03
NPLOC4-209ENST00000572760 DAOAP59103 153 aa15.24■□□□□ 0.03
NPLOC4-209ENST00000572760 YWHAGP61981 247 aaKnown RBP eCLIP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms