RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 CIZ1Q9ULV3 898 aaPredicted RBP32.12■■■□□ 2.73
CTDNEP1-206ENST00000571409 FAM92AA1XBS5 289 aa32.11■■■□□ 2.73
CTDNEP1-206ENST00000571409 NFATC1O95644 943 aa32.11■■■□□ 2.73
CTDNEP1-206ENST00000571409 GALK1P51570 392 aa32.11■■■□□ 2.73
CTDNEP1-206ENST00000571409 NR1H3Q13133 447 aa32.11■■■□□ 2.73
CTDNEP1-206ENST00000571409 NAIF1Q69YI7 327 aaPredicted RBP32.11■■■□□ 2.73
CTDNEP1-206ENST00000571409 EXOC4Q96A65 974 aa32.11■■■□□ 2.73
CTDNEP1-206ENST00000571409 HINFPQ9BQA5 517 aa32.11■■■□□ 2.73
CTDNEP1-206ENST00000571409 FBRSL1Q9HCM7 1045 aaKnown RBP32.11■■■□□ 2.73
CTDNEP1-206ENST00000571409 C2orf42Q9NWW7 574 aa32.11■■■□□ 2.73
CTDNEP1-206ENST00000571409 PSMA7O14818 248 aa32.1■■■□□ 2.73
CTDNEP1-206ENST00000571409 COCHO43405 550 aa32.1■■■□□ 2.73
CTDNEP1-206ENST00000571409 PAPSS2O95340 614 aaPredicted RBP32.1■■■□□ 2.73
CTDNEP1-206ENST00000571409 EGFP01133 1207 aa32.1■■■□□ 2.73
CTDNEP1-206ENST00000571409 CBWD6Q4V339 395 aa32.1■■■□□ 2.73
CTDNEP1-206ENST00000571409 CBWD3Q5JTY5 395 aa32.1■■■□□ 2.73
CTDNEP1-206ENST00000571409 CBWD5Q5RIA9 395 aa32.1■■■□□ 2.73
CTDNEP1-206ENST00000571409 HECTD3Q5T447 861 aa32.1■■■□□ 2.73
CTDNEP1-206ENST00000571409 SNX30Q5VWJ9 437 aa32.1■■■□□ 2.73
CTDNEP1-206ENST00000571409 CLEC20AQ6ZU45 233 aa32.1■■■□□ 2.73
CTDNEP1-206ENST00000571409 FAXDC2Q96IV6 333 aa32.1■■■□□ 2.73
CTDNEP1-206ENST00000571409 DNAI2Q9GZS0 605 aa32.1■■■□□ 2.73
CTDNEP1-206ENST00000571409 CFAP97Q9P2B7 532 aa32.1■■■□□ 2.73
CTDNEP1-206ENST00000571409 CD44P16070 742 aaKnown RBP32.09■■■□□ 2.73
CTDNEP1-206ENST00000571409 DRD1P21728 446 aa32.09■■■□□ 2.73
CTDNEP1-206ENST00000571409 ZNF394Q53GI3 561 aa32.09■■■□□ 2.73
CTDNEP1-206ENST00000571409 PKN3Q6P5Z2 889 aa32.09■■■□□ 2.73
CTDNEP1-206ENST00000571409 FILIP1Q7Z7B0 1213 aa32.09■■■□□ 2.73
CTDNEP1-206ENST00000571409 DDX42Q86XP3 938 aaKnown RBP eCLIP32.09■■■□□ 2.73
CTDNEP1-206ENST00000571409 CD101Q93033 1021 aa32.09■■■□□ 2.73
CTDNEP1-206ENST00000571409 JAKMIP2Q96AA8 810 aa32.09■■■□□ 2.73
CTDNEP1-206ENST00000571409 DHTKD1Q96HY7 919 aaPredicted RBP32.09■■■□□ 2.73
CTDNEP1-206ENST00000571409 EPC1Q9H2F5 836 aa32.09■■■□□ 2.73
CTDNEP1-206ENST00000571409 FBXO44Q9H4M3 255 aa32.09■■■□□ 2.73
CTDNEP1-206ENST00000571409 CCSER2Q9H7U1 834 aa32.09■■■□□ 2.73
CTDNEP1-206ENST00000571409 ARMCX3Q9UH62 379 aaPredicted RBP32.09■■■□□ 2.73
CTDNEP1-206ENST00000571409 MYO16Q9Y6X6 1858 aa32.08■■■□□ 2.73
CTDNEP1-206ENST00000571409 K7ESF4 209 aa32.08■■■□□ 2.73
CTDNEP1-206ENST00000571409 ZDHHC11BP0C7U3 371 aa32.08■■■□□ 2.73
CTDNEP1-206ENST00000571409 KIAA1958Q8N8K9 716 aa32.08■■■□□ 2.73
CTDNEP1-206ENST00000571409 RUBCNQ92622 972 aa32.08■■■□□ 2.73
CTDNEP1-206ENST00000571409 FAM186AA6NE01 2351 aa32.08■■■□□ 2.73
CTDNEP1-206ENST00000571409 CFAP54Q96N23 3096 aa32.08■■■□□ 2.73
CTDNEP1-206ENST00000571409 SCAMP3O14828 347 aaKnown RBP32.07■■■□□ 2.72
CTDNEP1-206ENST00000571409 PPP1R2P41236 205 aa32.07■■■□□ 2.72
CTDNEP1-206ENST00000571409 TUBP50607 506 aa32.07■■■□□ 2.72
CTDNEP1-206ENST00000571409 DMWDQ09019 674 aa32.07■■■□□ 2.72
CTDNEP1-206ENST00000571409 GPRIN1Q7Z2K8 1008 aa32.07■■■□□ 2.72
CTDNEP1-206ENST00000571409 TATDN2Q93075 761 aa32.07■■■□□ 2.72
CTDNEP1-206ENST00000571409 ARID3AQ99856 593 aa32.07■■■□□ 2.72
CTDNEP1-206ENST00000571409 CISHQ9NSE2 258 aa32.07■■■□□ 2.72
CTDNEP1-206ENST00000571409 SMG5Q9UPR3 1016 aaKnown RBP32.07■■■□□ 2.72
CTDNEP1-206ENST00000571409 RIF1Q5UIP0 2472 aaKnown RBP32.07■■■□□ 2.72
CTDNEP1-206ENST00000571409 CHURC1-FNTBB4DL54 471 aa32.06■■■□□ 2.72
CTDNEP1-206ENST00000571409 HHLA1C9JL84 531 aa32.06■■■□□ 2.72
CTDNEP1-206ENST00000571409 SLC9A3R1O14745 358 aaPredicted RBP32.06■■■□□ 2.72
CTDNEP1-206ENST00000571409 RNF40O75150 1001 aa32.06■■■□□ 2.72
CTDNEP1-206ENST00000571409 FNTBP49356 437 aa32.06■■■□□ 2.72
CTDNEP1-206ENST00000571409 PPP1R26Q5T8A7 1209 aaPredicted RBP32.06■■■□□ 2.72
CTDNEP1-206ENST00000571409 KLHL10Q6JEL2 608 aa32.06■■■□□ 2.72
CTDNEP1-206ENST00000571409 TTC39CQ8N584 583 aa32.06■■■□□ 2.72
CTDNEP1-206ENST00000571409 SLC35C1Q96A29 364 aa32.06■■■□□ 2.72
CTDNEP1-206ENST00000571409 COQ4Q9Y3A0 265 aa32.06■■■□□ 2.72
CTDNEP1-206ENST00000571409 BMP6P22004 513 aa32.05■■■□□ 2.72
CTDNEP1-206ENST00000571409 PGFP49763 221 aa32.05■■■□□ 2.72
CTDNEP1-206ENST00000571409 HEATR6Q6AI08 1181 aaKnown RBP32.05■■■□□ 2.72
CTDNEP1-206ENST00000571409 ADGRG2Q8IZP9 1017 aa32.05■■■□□ 2.72
CTDNEP1-206ENST00000571409 DCLK2Q8N568 766 aa32.05■■■□□ 2.72
CTDNEP1-206ENST00000571409 ZFRQ96KR1 1074 aaKnown RBP32.05■■■□□ 2.72
CTDNEP1-206ENST00000571409 HEXIM2Q96MH2 286 aaKnown RBP32.05■■■□□ 2.72
CTDNEP1-206ENST00000571409 PNPLA8Q9NP80 782 aa32.05■■■□□ 2.72
CTDNEP1-206ENST00000571409 TLR8Q9NR97 1041 aaKnown RBP32.05■■■□□ 2.72
CTDNEP1-206ENST00000571409 PTPRZ1P23471 2315 aaPredicted RBP32.04■■■□□ 2.72
CTDNEP1-206ENST00000571409 ATG13O75143 517 aa32.04■■■□□ 2.72
CTDNEP1-206ENST00000571409 CYP17A1P05093 508 aa32.04■■■□□ 2.72
CTDNEP1-206ENST00000571409 ACO1P21399 889 aaKnown RBP32.04■■■□□ 2.72
CTDNEP1-206ENST00000571409 FBXO43Q4G163 708 aa32.04■■■□□ 2.72
CTDNEP1-206ENST00000571409 TMEM176AQ96HP8 235 aa32.04■■■□□ 2.72
CTDNEP1-206ENST00000571409 CEP63Q96MT8 703 aa32.04■■■□□ 2.72
CTDNEP1-206ENST00000571409 NACA2Q9H009 215 aa32.04■■■□□ 2.72
CTDNEP1-206ENST00000571409 METTL14Q9HCE5 456 aaKnown RBP32.04■■■□□ 2.72
CTDNEP1-206ENST00000571409 NCDNQ9UBB6 729 aa32.04■■■□□ 2.72
CTDNEP1-206ENST00000571409 PPP1R3GB7ZBB8 358 aa32.03■■■□□ 2.72
CTDNEP1-206ENST00000571409 BIN1O00499 593 aa32.03■■■□□ 2.72
CTDNEP1-206ENST00000571409 HOXC13P31276 330 aa32.03■■■□□ 2.72
CTDNEP1-206ENST00000571409 MORC3Q14149 939 aa32.03■■■□□ 2.72
CTDNEP1-206ENST00000571409 LONP2Q86WA8 852 aa32.03■■■□□ 2.72
CTDNEP1-206ENST00000571409 SLC4A11Q8NBS3 891 aa32.03■■■□□ 2.72
CTDNEP1-206ENST00000571409 EZH1Q92800 747 aaPredicted RBP32.03■■■□□ 2.72
CTDNEP1-206ENST00000571409 DUSP9Q99956 384 aaKnown RBP32.03■■■□□ 2.72
CTDNEP1-206ENST00000571409 DUSP16Q9BY84 665 aa32.03■■■□□ 2.72
CTDNEP1-206ENST00000571409 FAM124BQ9H5Z6 455 aaPredicted RBP32.03■■■□□ 2.72
CTDNEP1-206ENST00000571409 TBC1D14Q9P2M4 693 aa32.03■■■□□ 2.72
CTDNEP1-206ENST00000571409 SCML2Q9UQR0 700 aa32.03■■■□□ 2.72
CTDNEP1-206ENST00000571409 E2F8A0AVK6 867 aa32.02■■■□□ 2.72
CTDNEP1-206ENST00000571409 CYP26A1O43174 497 aa32.02■■■□□ 2.72
CTDNEP1-206ENST00000571409 TLR5O60602 858 aa32.02■■■□□ 2.72
CTDNEP1-206ENST00000571409 OPRD1P41143 372 aa32.02■■■□□ 2.72
CTDNEP1-206ENST00000571409 RAD23BP54727 409 aa32.02■■■□□ 2.72
CTDNEP1-206ENST00000571409 DHCR24Q15392 516 aa32.02■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms