RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CACTIN-AS1Q8N1I8 211 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 STKLD1Q8NE28 680 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 LRRC15Q8TF66 581 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 IGSF8Q969P0 613 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 MIB2Q96AX9 1013 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 CCNL2Q96S94 520 aaPredicted RBP7.49□□□□□ -1.21
CHD3-213ENST00000571249 PNKPQ96T60 521 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 MMS19Q96T76 1030 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 ACOX2Q99424 681 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 SEPT5Q99719 369 aaPredicted RBP7.49□□□□□ -1.21
CHD3-213ENST00000571249 IL25Q9H293 177 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 POLR1BQ9H9Y6 1135 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 THSD1Q9NS62 852 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 GEMIN8Q9NWZ8 242 aaKnown RBP7.49□□□□□ -1.21
CHD3-213ENST00000571249 WSB2Q9NYS7 404 aaPredicted RBP7.49□□□□□ -1.21
CHD3-213ENST00000571249 RAD54BQ9Y620 910 aa7.49□□□□□ -1.21
CHD3-213ENST00000571249 ZNF638Q14966 1978 aaKnown RBP7.49□□□□□ -1.21
CHD3-213ENST00000571249 MYOFQ9NZM1 2061 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 A0A0A0MRY4 1105 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 MYMKA6NI61 221 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 SCAMP3O14828 347 aaKnown RBP7.48□□□□□ -1.21
CHD3-213ENST00000571249 ZBTB24O43167 697 aaPredicted RBP7.48□□□□□ -1.21
CHD3-213ENST00000571249 OAZ2O95190 189 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 NFATC1O95644 943 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 ABL1P00519 1130 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 APODP05090 189 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 FBXO45P0C2W1 286 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 ATF6P18850 670 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 DDX6P26196 483 aaKnown RBP eCLIP7.48□□□□□ -1.21
CHD3-213ENST00000571249 ERCC5P28715 1186 aaPredicted RBP7.48□□□□□ -1.21
CHD3-213ENST00000571249 AFF3P51826 1226 aaKnown RBP7.48□□□□□ -1.21
CHD3-213ENST00000571249 OXCT1P55809 520 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 NLRP12P59046 1061 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 YWHAHQ04917 246 aaPredicted RBP7.48□□□□□ -1.21
CHD3-213ENST00000571249 ST3GAL1Q11201 340 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 PRPF4BQ13523 1007 aaKnown RBP7.48□□□□□ -1.21
CHD3-213ENST00000571249 SHBQ15464 509 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 TSNAXIP1Q2TAA8 658 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 LRRK1Q38SD2 2015 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 FHL5Q5TD97 284 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 KIAA1324Q6UXG2 1013 aaKnown RBP7.48□□□□□ -1.21
CHD3-213ENST00000571249 IPO4Q8TEX9 1081 aaKnown RBP7.48□□□□□ -1.21
CHD3-213ENST00000571249 ZNF592Q92610 1267 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 MOCOSQ96EN8 888 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 SGF29Q96ES7 293 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 TMEM87BQ96K49 555 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 MRGPRX1Q96LB2 322 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 PRIMPOLQ96LW4 560 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 ADPGKQ9BRR6 497 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 C6orf50Q9HD87 102 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 ARHGEF4Q9NR80 690 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 SLC38A7Q9NVC3 462 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 NFE2L3Q9Y4A8 694 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 NUMA1Q14980 2115 aa7.48□□□□□ -1.21
CHD3-213ENST00000571249 PRRC2CQ9Y520 2896 aaKnown RBP7.47□□□□□ -1.21
CHD3-213ENST00000571249 LRRIQ4A6NIV6 560 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 OR6C75A6NL08 312 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 HIP1O00291 1037 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 TRIM24O15164 1050 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 LARGE1O95461 756 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 RECKO95980 971 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 CYP17A1P05093 508 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 P4HBP07237 508 aaKnown RBP7.47□□□□□ -1.21
CHD3-213ENST00000571249 LIG1P18858 919 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 MAPK1P28482 360 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 RPL9P32969 192 aaKnown RBP7.47□□□□□ -1.21
CHD3-213ENST00000571249 GRIA2P42262 883 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 CTSKP43235 329 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 TUFMP49411 452 aaKnown RBP7.47□□□□□ -1.21
CHD3-213ENST00000571249 ZXDBP98169 803 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 FAM160A1Q05DH4 1040 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 FUT2Q10981 343 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 MGAT5BQ3V5L5 792 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 Q4G0T1 1027 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 SGO2Q562F6 1265 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 MAMDC2Q7Z304 686 aaPredicted RBP7.47□□□□□ -1.21
CHD3-213ENST00000571249 C4orf19Q8IY42 314 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 CADM4Q8NFZ8 388 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 SH3RF2Q8TEC5 729 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 SNX19Q92543 992 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 MRPS31Q92665 395 aaKnown RBP7.47□□□□□ -1.21
CHD3-213ENST00000571249 C18orf25Q96B23 403 aaPredicted RBP7.47□□□□□ -1.21
CHD3-213ENST00000571249 ZMAT2Q96NC0 199 aaKnown RBP7.47□□□□□ -1.21
CHD3-213ENST00000571249 SLC46A1Q96NT5 459 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 OXCT2Q9BYC2 517 aaPredicted RBP7.47□□□□□ -1.21
CHD3-213ENST00000571249 LNPKQ9C0E8 428 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 ZMYND12Q9H0C1 365 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 POLR3FQ9H1D9 316 aaPredicted RBP7.47□□□□□ -1.21
CHD3-213ENST00000571249 SLKQ9H2G2 1235 aaPredicted RBP7.47□□□□□ -1.21
CHD3-213ENST00000571249 OSBPL3Q9H4L5 887 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 ITGB1BP2Q9UKP3 347 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 PHLPP2Q6ZVD8 1323 aa7.47□□□□□ -1.21
CHD3-213ENST00000571249 TRIP11Q15643 1979 aa7.46□□□□□ -1.21
CHD3-213ENST00000571249 A0A1B0GTQ1 180 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 TBC1D3BA6NDS4 549 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 PPP1R3GB7ZBB8 358 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 BHMG1C9JSJ3 638 aaPredicted RBP7.46□□□□□ -1.22
CHD3-213ENST00000571249 C3orf80F5H4A9 247 aa7.46□□□□□ -1.22
CHD3-213ENST00000571249 PAPSS1O43252 624 aaPredicted RBP7.46□□□□□ -1.22
CHD3-213ENST00000571249 GJB6O95452 261 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms