RNA–Protein interactions for RNA: ENST00000571120.5

ABR-210, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-210	ENST00000571120	IFNAR2	P48551	515 aa		12.83	□□□□□ -0.36
ABR-210	ENST00000571120	PGF	P49763	221 aa		12.83	□□□□□ -0.36
ABR-210	ENST00000571120	MXI1	P50539	228 aa		12.83	□□□□□ -0.36
ABR-210	ENST00000571120	GALK1	P51570	392 aa		12.83	□□□□□ -0.36
ABR-210	ENST00000571120	AMPD2	Q01433	879 aa		12.83	□□□□□ -0.36
ABR-210	ENST00000571120	GRSF1	Q12849	480 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
ABR-210	ENST00000571120	ANKRD40	Q6AI12	368 aa		12.83	□□□□□ -0.36
ABR-210	ENST00000571120	CLEC20A	Q6ZU45	233 aa		12.83	□□□□□ -0.36
ABR-210	ENST00000571120	FBXO32	Q969P5	355 aa		12.83	□□□□□ -0.36
ABR-210	ENST00000571120	HNRNPAB	Q99729	332 aa	Known RBP	12.83	□□□□□ -0.36
ABR-210	ENST00000571120	DUSP9	Q99956	384 aa	Known RBP	12.83	□□□□□ -0.36
ABR-210	ENST00000571120	P2RY13	Q9BPV8	354 aa		12.83	□□□□□ -0.36
ABR-210	ENST00000571120	NT5C1A	Q9BXI3	368 aa		12.83	□□□□□ -0.36
ABR-210	ENST00000571120	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
ABR-210	ENST00000571120	FAM49B	Q9NUQ9	324 aa		12.83	□□□□□ -0.36
ABR-210	ENST00000571120	SMG5	Q9UPR3	1016 aa	Known RBP	12.83	□□□□□ -0.36
ABR-210	ENST00000571120	ATG2B	Q96BY7	2078 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	TRIM49B	A6NDI0	452 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	COCH	O43405	550 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	SMC2	O95347	1197 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	NFATC1	O95644	943 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	EPB41	P11171	864 aa	Known RBP	12.82	□□□□□ -0.36
ABR-210	ENST00000571120	BMP6	P22004	513 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	MAP3K7CL	P57077	242 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	FKBP3	Q00688	224 aa	Known RBP	12.82	□□□□□ -0.36
ABR-210	ENST00000571120	LRRC63	Q05C16	580 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	IFRD2	Q12894	506 aa	Predicted RBP	12.82	□□□□□ -0.36
ABR-210	ENST00000571120	CBWD6	Q4V339	395 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	CBWD3	Q5JTY5	395 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	CBWD5	Q5RIA9	395 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	GPRIN1	Q7Z2K8	1008 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	FILIP1	Q7Z7B0	1213 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	ADGRG2	Q8IZP9	1017 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	DCLK2	Q8N568	766 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	FBXL13	Q8NEE6	735 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	SMARCE1	Q969G3	411 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	GTPBP4	Q9BZE4	634 aa	Known RBP	12.82	□□□□□ -0.36
ABR-210	ENST00000571120	FAM124B	Q9H5Z6	455 aa	Predicted RBP	12.82	□□□□□ -0.36
ABR-210	ENST00000571120	MMRN2	Q9H8L6	949 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	PNPLA8	Q9NP80	782 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	RAB20	Q9NX57	234 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	SMPD4	Q9NXE4	827 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	GMIP	Q9P107	970 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	COQ4	Q9Y3A0	265 aa		12.82	□□□□□ -0.36
ABR-210	ENST00000571120	STX10	O60499	249 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	RNF40	O75150	1001 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	ABL1	P00519	1130 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	CYP17A1	P05093	508 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	FAM200B	P0CF97	657 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	MBL2	P11226	248 aa	Predicted RBP	12.81	□□□□□ -0.36
ABR-210	ENST00000571120	CHRM1	P11229	460 aa	Predicted RBP	12.81	□□□□□ -0.36
ABR-210	ENST00000571120	CD44	P16070	742 aa	Known RBP	12.81	□□□□□ -0.36
ABR-210	ENST00000571120	CD58	P19256	250 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	OPRD1	P41143	372 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	FNTB	P49356	437 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	FBXO43	Q4G163	708 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	HECTD3	Q5T447	861 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	LONP2	Q86WA8	852 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	DDX42	Q86XP3	938 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
ABR-210	ENST00000571120	TTC16	Q8NEE8	873 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	CD101	Q93033	1021 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	SLC35C1	Q96A29	364 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	CYFIP2	Q96F07	1278 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	TSG101	Q99816	390 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	ARID3A	Q99856	593 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	FBXO44	Q9H4M3	255 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	CCSER2	Q9H7U1	834 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	CYLD	Q9NQC7	956 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	CFAP97	Q9P2B7	532 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	CHORDC1	Q9UHD1	332 aa	Predicted RBP	12.81	□□□□□ -0.36
ABR-210	ENST00000571120	MAN1B1	Q9UKM7	699 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	SCML2	Q9UQR0	700 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	EML5	Q05BV3	1969 aa		12.81	□□□□□ -0.36
ABR-210	ENST00000571120	CCDC163	A0A0D9SF12	145 aa		12.8	□□□□□ -0.36
ABR-210	ENST00000571120	E2F8	A0AVK6	867 aa		12.8	□□□□□ -0.36
ABR-210	ENST00000571120	HR	O43593	1189 aa		12.8	□□□□□ -0.36
ABR-210	ENST00000571120	GREM1	O60565	184 aa		12.8	□□□□□ -0.36
ABR-210	ENST00000571120	TGM1	P22735	817 aa		12.8	□□□□□ -0.36
ABR-210	ENST00000571120	ADORA2B	P29275	332 aa		12.8	□□□□□ -0.36
ABR-210	ENST00000571120	CNR2	P34972	360 aa		12.8	□□□□□ -0.36
ABR-210	ENST00000571120	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	12.8	□□□□□ -0.36
ABR-210	ENST00000571120	FOXR2	Q6PJQ5	311 aa		12.8	□□□□□ -0.36
ABR-210	ENST00000571120	WDR5B	Q86VZ2	330 aa		12.8	□□□□□ -0.36
ABR-210	ENST00000571120	SLC4A11	Q8NBS3	891 aa		12.8	□□□□□ -0.36
ABR-210	ENST00000571120	CCDC150	Q8NCX0	1101 aa		12.8	□□□□□ -0.36
ABR-210	ENST00000571120	EXOC4	Q96A65	974 aa		12.8	□□□□□ -0.36
ABR-210	ENST00000571120	CISH	Q9NSE2	258 aa		12.8	□□□□□ -0.36
ABR-210	ENST00000571120	OSER1	Q9NX31	292 aa		12.8	□□□□□ -0.36
ABR-210	ENST00000571120	HOOK1	Q9UJC3	728 aa	Known RBP	12.8	□□□□□ -0.36
ABR-210	ENST00000571120	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.8	□□□□□ -0.36
ABR-210	ENST00000571120	MYOF	Q9NZM1	2061 aa		12.8	□□□□□ -0.36
ABR-210	ENST00000571120		K7EQS6	105 aa		12.79	□□□□□ -0.36
ABR-210	ENST00000571120	SLC9A3R1	O14745	358 aa	Predicted RBP	12.79	□□□□□ -0.36
ABR-210	ENST00000571120	PMM2	O15305	246 aa		12.79	□□□□□ -0.36
ABR-210	ENST00000571120	CYP26A1	O43174	497 aa		12.79	□□□□□ -0.36
ABR-210	ENST00000571120	TLR5	O60602	858 aa		12.79	□□□□□ -0.36
ABR-210	ENST00000571120	ATG13	O75143	517 aa		12.79	□□□□□ -0.36
ABR-210	ENST00000571120	GADD45B	O75293	160 aa	Predicted RBP	12.79	□□□□□ -0.36
ABR-210	ENST00000571120	TRIM21	P19474	475 aa	Known RBP	12.79	□□□□□ -0.36
ABR-210	ENST00000571120	EIF2D	P41214	584 aa	Known RBP	12.79	□□□□□ -0.36

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