RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 YWHAQP27348 245 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 PSMC2P35998 433 aaKnown RBP13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 ASPAP45381 313 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 GCLMP48507 274 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 NDST1P52848 882 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 NR1H3Q13133 447 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 ADAM9Q13443 819 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 ZCWPW2Q504Y3 356 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 C1orf220Q5T0J3 134 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 SPOPLQ6IQ16 392 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 ACOT1Q86TX2 421 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 KIAA2013Q8IYS2 634 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 CCDC150Q8NCX0 1101 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 PDZD8Q8NEN9 1154 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 OVCA2Q8WZ82 227 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 FBXO32Q969P5 355 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 P2RY13Q9BPV8 354 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 MMRN2Q9H8L6 949 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 RAB23Q9ULC3 237 aa13.12□□□□□ -0.31
CTDNEP1-205ENST00000570828 LEFTY2O00292 366 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 NFATC1O95644 943 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 OLFM2O95897 454 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 OAS1P00973 400 aaKnown RBP13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 CCDC130P13994 396 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 DRD1P21728 446 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 GJA4P35212 333 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 SLC5A3P53794 718 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 SLC7A9P82251 487 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 ENPEPQ07075 957 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 ORC1Q13415 861 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 PNOCQ13519 176 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 EML3Q32P44 896 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 EDRF1Q3B7T1 1238 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 FSTL4Q6MZW2 842 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 UNC93AQ86WB7 457 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 SMYD4Q8IYR2 804 aaPredicted RBP13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 FUKQ8N0W3 1084 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 FMR1NBQ8N0W7 255 aaPredicted RBP13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 DCLK2Q8N568 766 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 SLC2A14Q8TDB8 520 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 TAS1R2Q8TE23 839 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 CHFRQ96EP1 664 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 KCNK16Q96T55 309 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 NIF3L1Q9GZT8 377 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 TMEM8AQ9HCN3 771 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 SMPD4Q9NXE4 827 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 HMGXB4Q9UGU5 601 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 GMEB2Q9UKD1 530 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 CPQQ9Y646 472 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 DMXL1Q9Y485 3027 aa13.11□□□□□ -0.31
CTDNEP1-205ENST00000570828 CHURC1-FNTBB4DL54 471 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 K7ESF4 209 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 ATG13O75143 517 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 SMC2O95347 1197 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 EGFP01133 1207 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 EPB41P11171 864 aaKnown RBP13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 MBL2P11226 248 aaPredicted RBP13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 GTF2H1P32780 548 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 FNTBP49356 437 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 PPP3CAQ08209 521 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 CAMK2BQ13554 666 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 FBXO43Q4G163 708 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 C6orf132Q5T0Z8 1188 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 HEATR6Q6AI08 1181 aaKnown RBP13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 PRR23BQ6ZRT6 265 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 PAQR9Q6ZVX9 377 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 LONP2Q86WA8 852 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 DDX42Q86XP3 938 aaKnown RBP eCLIP13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 CRYBG2Q8N1P7 616 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 CD101Q93033 1021 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 TSG101Q99816 390 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 DNAI2Q9GZS0 605 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 CYP3A43Q9HB55 503 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 FAM49BQ9NUQ9 324 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 C2orf42Q9NWW7 574 aa13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 HOOK1Q9UJC3 728 aaKnown RBP13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 KIF26AQ9ULI4 1882 aaPredicted RBP13.1□□□□□ -0.31
CTDNEP1-205ENST00000570828 SLC9A3R1O14745 358 aaPredicted RBP13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 CETN3O15182 167 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 STX10O60499 249 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 RNF40O75150 1001 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 FAM200BP0CF97 657 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 CD58P19256 250 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 CNR2P34972 360 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 ID4P47928 161 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 MXI1P50539 228 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 GALK1P51570 392 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 DMWDQ09019 674 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 INCA1Q0VD86 236 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 LPAL2Q16609 132 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 HECTD3Q5T447 861 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 NAIF1Q69YI7 327 aaPredicted RBP13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 KRT39Q6A163 491 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 FILIP1Q7Z7B0 1213 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 KIAA1958Q8N8K9 716 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 SCAMP5Q8TAC9 235 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 SMARCE1Q969G3 411 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 EEF2KMTQ96G04 330 aa13.09□□□□□ -0.31
CTDNEP1-205ENST00000570828 GSDMAQ96QA5 445 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms