RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TBC1D4O60343 1298 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 FBXO21O94952 628 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 FTLP02792 175 aaPredicted RBP6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 CYP1A1P04798 512 aaPredicted RBP6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 TMEM253P0C7T8 217 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 HAPLN1P10915 354 aaPredicted RBP6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 LCP1P13796 627 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 ATF2P15336 505 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 CYP2F1P24903 491 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 CTHP32929 405 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 CDH5P33151 784 aaPredicted RBP6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 GPD2P43304 727 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 SLC5A3P53794 718 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 EPHB3P54753 998 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 ERVFC1P60507 584 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 ADIGQ0VDE8 80 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 FAM102AQ5T9C2 384 aaPredicted RBP6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 CYP4A22Q5TCH4 519 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 OR6B2Q6IFH4 312 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 DCUN1D2Q6PH85 259 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 RSPO2Q6UXX9 243 aaPredicted RBP6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 MON1BQ7L1V2 547 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 ITIH5Q86UX2 942 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 PIGZQ86VD9 579 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 LRRTM3Q86VH5 581 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 PHF13Q86YI8 300 aaPredicted RBP6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZDHHC17Q8IUH5 632 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 RHOT2Q8IXI1 618 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 MRPL43Q8N983 215 aaKnown RBP6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 KREMEN2Q8NCW0 462 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 SLC7A14Q8TBB6 771 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 STK32AQ8WU08 396 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 RFFLQ8WZ73 363 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 FAM149B1Q96BN6 582 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 C18orf8Q96DM3 657 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 MRPL38Q96DV4 380 aaKnown RBP6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 HSFY1Q96LI6 401 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 C8orf48Q96LL4 319 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 KLHL5Q96PQ7 755 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 ALS2CR12Q96Q35 445 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 GCNAQ96QF7 691 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 CPXM1Q96SM3 734 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 PCDHB18PQ96TA0 734 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 GAS2L1Q99501 681 aaPredicted RBP6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 PKMYT1Q99640 499 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 CLSTN3Q9BQT9 956 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZSWIM1Q9BR11 485 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 OCSTAMPQ9BR26 566 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 SELENOOQ9BVL4 669 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 PRO3102Q9H379 93 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 FBXO44Q9H4M3 255 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 MRPL47Q9HD33 250 aaKnown RBP6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 CYLDQ9NQC7 956 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 TMLHEQ9NVH6 421 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 CTTNBP2NLQ9P2B4 639 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 WDR35Q9P2L0 1181 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 MYO1AQ9UBC5 1043 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 HSFX1Q9UBD0 423 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 CNOT8Q9UFF9 292 aaKnown RBP6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 FBXW11Q9UKB1 542 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 INTUQ9ULD6 942 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZKSCAN5Q9Y2L8 839 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 PCDHA13Q9Y5I0 950 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 INSL5Q9Y5Q6 135 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 PTPRSQ13332 1948 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 MACROD2A1Z1Q3 448 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 HIDE1A8MVS5 230 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 PIK3R2O00459 728 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 ADAM12O43184 909 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 TGM5O43548 720 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 XYLBO75191 536 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 RTN3O95197 1032 aaPredicted RBP6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 LCA5LO95447 670 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 C8AP07357 584 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 CSH1P0DML2 217 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 CSH2P0DML3 217 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 UNGP13051 313 aaPredicted RBP6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 MMP8P22894 467 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 DNAJB1P25685 340 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 IRS1P35568 1242 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 NOP2P46087 812 aaKnown RBP6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 TKTL1P51854 596 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 GALCP54803 685 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 GPC5P78333 572 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 TWF1Q12792 350 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 DUSP4Q13115 394 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 ASTE1Q2TB18 679 aaPredicted RBP6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 PTPN20Q4JDL3 420 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 PKDCCQ504Y2 493 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 PPM1LQ5SGD2 360 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 LLGL2Q6P1M3 1020 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 LIAT1Q6ZQX7 453 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 DENND5BQ6ZUT9 1274 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 RBM23Q86U06 439 aaKnown RBP6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 TCEAL8Q8IYN2 117 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 MCOLN2Q8IZK6 566 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 ARHGAP18Q8N392 663 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 TTC9BQ8N6N2 239 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 C3orf20Q8ND61 904 aa6.92□□□□□ -1.3
CTDNEP1-204ENST00000570484 PDZD8Q8NEN9 1154 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms