RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 SMOC2Q9H3U7 446 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 MLXIPQ9HAP2 919 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 RAD54BQ9Y620 910 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 HS3ST3A1Q9Y663 406 aa4.29□□□□□ -1.72
UBR1-211ENST00000569971 BRD4O60885 1362 aaPredicted RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 GPRASP1Q5JY77 1395 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 PRDM15P57071 1507 aaPredicted RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 ZFYVE16Q7Z3T8 1539 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 hCG_1984214I3L0E3 225 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 LEFTY2O00292 366 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 IRAK2O43187 625 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 CCP110O43303 1012 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 RRP9O43818 475 aaKnown RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 COQ9O75208 318 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 USP1O94782 785 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 RASAL1O95294 804 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 GYS1P13807 737 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 PECAM1P16284 738 aaPredicted RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 EGR1P18146 543 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 MGAT1P26572 445 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 MSX2P35548 267 aaPredicted RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 GCLCP48506 637 aaPredicted RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 ZNF134P52741 427 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 TMF1P82094 1093 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 KRT17Q04695 432 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 PIGFQ07326 219 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 ZNF844Q08AG5 666 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 ABHD18Q0P651 414 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 FOXE3Q13461 319 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 MAPRE1Q15691 268 aaKnown RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 TAF12Q16514 161 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 SMN1Q16637 294 aaKnown RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 PTCHD3Q3KNS1 767 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 CCDC184Q52MB2 194 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 METTL24Q5JXM2 366 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 FAXCQ5TGI0 409 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 CACHD1Q5VU97 1274 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 ARL6IP4Q66PJ3 421 aaKnown RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 TANGO2Q6ICL3 276 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 USP17L6PQ6QN14 398 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 GSPT2Q8IYD1 628 aaKnown RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 ANKRD35Q8N283 1001 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 D2HGDHQ8N465 521 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 IL17REQ8NFR9 667 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 OTUD7AQ8TE49 926 aaPredicted RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 ZNF483Q8TF39 744 aaPredicted RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 RUBCNQ92622 972 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 RILPL2Q969X0 211 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 EID2BQ96D98 161 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 NEU1Q99519 415 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 KATNAL1Q9BW62 490 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 VPS45Q9NRW7 570 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 TERF2IPQ9NYB0 399 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 DNMT3BQ9UBC3 853 aaKnown RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 HSFX1Q9UBD0 423 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 SRP68Q9UHB9 627 aaKnown RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 HERC5Q9UII4 1024 aaKnown RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 SHOC2Q9UQ13 582 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 MRPS17Q9Y2R5 130 aaKnown RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 HS3ST4Q9Y661 456 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 CDY1Q9Y6F8 540 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 SLC30A1Q9Y6M5 507 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 A2MP01023 1474 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 PLA2R1Q13018 1463 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 E9PCH4 1651 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 SMG6Q86US8 1419 aaKnown RBP4.28□□□□□ -1.72
UBR1-211ENST00000569971 TRAPPC8Q9Y2L5 1435 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 DEPDC5O75140 1603 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 ABCA9Q8IUA7 1624 aa4.28□□□□□ -1.72
UBR1-211ENST00000569971 AATKQ6ZMQ8 1374 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 CFAP74Q9C0B2 1584 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 INO80Q9ULG1 1556 aaPredicted RBP4.27□□□□□ -1.73
UBR1-211ENST00000569971 TRPM2O94759 1503 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 ATP7AQ04656 1500 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 TET3O43151 1660 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 FANCAO15360 1455 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 A0A0B4J269 797 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 B9A039 149 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 FCHO1O14526 889 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 RGS10O43665 173 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 PIAS2O75928 621 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 IPO13O94829 963 aaKnown RBP4.27□□□□□ -1.73
UBR1-211ENST00000569971 ATXN1LP0C7T5 689 aaKnown RBP4.27□□□□□ -1.73
UBR1-211ENST00000569971 SPATA31D3P0C874 917 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 CKMT1AP12532 417 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 NPPBP16860 134 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 ACO1P21399 889 aaKnown RBP4.27□□□□□ -1.73
UBR1-211ENST00000569971 HIBADHP31937 336 aaKnown RBP4.27□□□□□ -1.73
UBR1-211ENST00000569971 PNLIPRP1P54315 467 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 INHBEP58166 350 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 NHLH2Q02577 135 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 FSTL1Q12841 308 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 G3BP1Q13283 466 aaKnown RBP eCLIP4.27□□□□□ -1.73
UBR1-211ENST00000569971 SIM2Q14190 667 aaPredicted RBP4.27□□□□□ -1.73
UBR1-211ENST00000569971 FHL2Q14192 279 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 ZNF750Q32MQ0 723 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 MGAT5BQ3V5L5 792 aa4.27□□□□□ -1.73
UBR1-211ENST00000569971 FAM102AQ5T9C2 384 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms