RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 MRPL45Q9BRJ2 306 aaKnown RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 TMEM175Q9BSA9 504 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 ACP6Q9NPH0 428 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 PAK5Q9P286 719 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 DMGDHQ9UI17 866 aaKnown RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 NLRC5Q86WI3 1866 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 A0A1W2PQ45 241 aaPredicted RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 A0A1W2PQY0 241 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 E5RJQ4 531 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 PPP1R12AO14974 1030 aaPredicted RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 INPPL1O15357 1258 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 PDGFRBP09619 1106 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 TSHRP16473 764 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 MX2P20592 715 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 PLTPP55058 493 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 VCPP55072 806 aaKnown RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 YWHAZP63104 245 aaKnown RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 YWHAHQ04917 246 aaPredicted RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 PDE4CQ08493 712 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 PTPROQ16827 1216 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 ERMARDQ5T6L9 678 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 PPP1R26Q5T8A7 1209 aaPredicted RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 AGBL2Q5U5Z8 902 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 KAZNQ674X7 775 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 SCML4Q8N228 414 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 LRRN4CLQ8ND94 238 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 MYCBPAPQ8TBZ2 947 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 KRT35Q92764 455 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 RNF34Q969K3 372 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 ZBTB10Q96DT7 871 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 EPAS1Q99814 870 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 FAM107BQ9H098 131 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 KLC2Q9H0B6 622 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 POPDC2Q9HBU9 364 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 IKBKGQ9Y6K9 419 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 H7C0C1 242 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 ZBED1O96006 694 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 CYP11A1P05108 521 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 RARGP13631 454 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 ATP5OP48047 213 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 PSEN1P49768 467 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 SCNN1GP51170 649 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 KPNA1P52294 538 aaPredicted RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 PMS2P54278 862 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 RPL10AP62906 217 aaKnown RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 CBX1P83916 185 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 CREMQ03060 361 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 MORF4L2Q15014 288 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 LGSNQ5TDP6 509 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 DUPD1Q68J44 220 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 VSTM1Q6UX27 236 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 BEND5Q7L4P6 421 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 PRELID2Q8N945 189 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 SLC35F5Q8WV83 523 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 CASKIN2Q8WXE0 1202 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 SEC14L1Q92503 715 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 HSPH1Q92598 858 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 NKD2Q969F2 451 aaPredicted RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 SUSD3Q96L08 255 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 CPXM1Q96SM3 734 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 TRIM31Q9BZY9 425 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 OLA1Q9NTK5 396 aaKnown RBP6.3□□□□□ -1.4
CYLD-216ENST00000569891 SHOC2Q9UQ13 582 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 SSX2IPQ9Y2D8 614 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 HES2Q9Y543 173 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 GRIN2DO15399 1336 aa6.3□□□□□ -1.4
CYLD-216ENST00000569891 PSMD3O43242 534 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 RTN3O95197 1032 aaPredicted RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 TRUB2O95900 331 aaKnown RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 ALDH2P05091 517 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 RARAP10276 462 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 CKBP12277 381 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 KDELR1P24390 212 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 RFC1P35251 1148 aaPredicted RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 MATKP42679 507 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 LMAN1P49257 510 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 SULT1E1P49888 294 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 GUCY2FP51841 1108 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 ARL4CP56559 192 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 XRCC4Q13426 336 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 DSC3Q14574 896 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 LPIN1Q14693 890 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 DNAJC21Q5F1R6 531 aaKnown RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 PPP1R15BQ5SWA1 713 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 DARS2Q6PI48 645 aaKnown RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 FAM183BPQ6ZVS7 135 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 ADAT2Q7Z6V5 191 aaKnown RBP6.29□□□□□ -1.4
CYLD-216ENST00000569891 ANKLE1Q8NAG6 615 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 SLC2A14Q8TDB8 520 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 BTBD6Q96KE9 485 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 SDCBP2Q9H190 292 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 CDHR5Q9HBB8 845 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 PSD3Q9NYI0 1048 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 VPS18Q9P253 973 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 hCG_1818297A0A087WSY0 165 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 MYADML2A6NDP7 307 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 C2CD4BA6NLJ0 364 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 CHRNA1P02708 482 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 LCP1P13796 627 aa6.29□□□□□ -1.4
CYLD-216ENST00000569891 IBSPP21815 317 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms