RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 LCP1P13796 627 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 YWHAEP62258 255 aaKnown RBP9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 PFKPQ01813 784 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 STX1AQ16623 288 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 MAN2A1Q16706 1144 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 EXOC3L4Q17RC7 722 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 VWA3BQ502W6 1294 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 GBP6Q6ZN66 633 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 PIGZQ86VD9 579 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 TTC30AQ86WT1 665 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 FAM114A1Q8IWE2 563 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 CELF5Q8N6W0 485 aaKnown RBP9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 RBBP8NLQ8NC74 664 aaPredicted RBP9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 SH3RF2Q8TEC5 729 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 TFAP2BQ92481 460 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 IRF7Q92985 503 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 MYRFLQ96LU7 910 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 TUBGCP2Q9BSJ2 902 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 DUSP16Q9BY84 665 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 DNAI2Q9GZS0 605 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 LINC00597Q9H2U6 94 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 SLC2A4RGQ9NR83 387 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 ANO10Q9NW15 660 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 FANCLQ9NW38 375 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 AJAP1Q9UKB5 411 aaPredicted RBP9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 CPQQ9Y646 472 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 PIAS3Q9Y6X2 628 aa9.53□□□□□ -0.88
GTF3C1-210ENST00000569394 HHLA1C9JL84 531 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 M0QYV0 167 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 LEFTY2O00292 366 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 TNFRSF10BO14763 440 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 LETM1O95202 739 aaPredicted RBP9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 CDK11BP21127 795 aaKnown RBP9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 TBXAS1P24557 533 aaPredicted RBP9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 DDX6P26196 483 aaKnown RBP eCLIP9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 PON1P27169 355 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 ERCC5P28715 1186 aaPredicted RBP9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 IFNAR2P48551 515 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 KLK7P49862 253 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 MARSP56192 900 aaKnown RBP9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 ZXDBP98169 803 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 TYRO3Q06418 890 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 PDE4CQ08493 712 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 MTF1Q14872 753 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 PON2Q15165 354 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 ANO6Q4KMQ2 910 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 TCP11X2Q5H9J9 407 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 NAIF1Q69YI7 327 aaPredicted RBP9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 TRIM65Q6PJ69 517 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 BMP8AQ7Z5Y6 402 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 KMT2EQ8IZD2 1858 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 AOPEPQ8N6M6 819 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 DEPDC1BQ8WUY9 529 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 FAM3CQ92520 227 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 WBP2Q969T9 261 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 PCMTD1Q96MG8 357 aaPredicted RBP9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 TTLL2Q9BWV7 592 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 LSM14BQ9BX40 385 aaKnown RBP9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 NDST4Q9H3R1 872 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 NMUR1Q9HB89 426 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 RBM12Q9NTZ6 932 aaKnown RBP9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 THG1LQ9NWX6 298 aaKnown RBP9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 DUS2Q9NX74 493 aaKnown RBP9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 EHD2Q9NZN4 543 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 CFAP97Q9P2B7 532 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 HESX1Q9UBX0 185 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 NAGPAQ9UK23 515 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 DNAJC12Q9UKB3 198 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 SIT1Q9Y3P8 196 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 TRIOO75962 3097 aa9.52□□□□□ -0.89
GTF3C1-210ENST00000569394 PIEZO1Q92508 2521 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 KANSL1LA0AUZ9 987 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 SYCE3A1L190 88 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 OTOL1A6NHN0 477 aaPredicted RBP9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 CHADO15335 359 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 P4HA2O15460 535 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 COCHO43405 550 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 THAP12O43422 761 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 VDRP11473 427 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 RARGP13631 454 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 GLULP15104 373 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 TARSP26639 723 aaKnown RBP9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 TKTL1P51854 596 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 SLC8A3P57103 927 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 MCCD1P59942 119 aaPredicted RBP9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 ADIGQ0VDE8 80 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 KCNMA1Q12791 1236 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 RAPGEF1Q13905 1077 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 ARHGAP29Q52LW3 1261 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 MIIPQ5JXC2 388 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 C10orf120Q5SQS8 335 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 HECTD3Q5T447 861 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 FOXR2Q6PJQ5 311 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 RBM43Q6ZSC3 357 aaKnown RBP9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 MIB1Q86YT6 1006 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 PASD1Q8IV76 773 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 UBR7Q8N806 425 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 PRSS33Q8NF86 280 aa9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 SECISBP2LQ93073 1101 aaKnown RBP9.51□□□□□ -0.89
GTF3C1-210ENST00000569394 BHMTQ93088 406 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms