RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	BPIFB1	Q8TDL5	484 aa		4.2	□□□□□ -1.74
UBR1-209	ENST00000569243	NSMCE1	Q8WV22	266 aa		4.2	□□□□□ -1.74
UBR1-209	ENST00000569243	PPP2R3C	Q969Q6	453 aa		4.2	□□□□□ -1.74
UBR1-209	ENST00000569243	SUCLG2	Q96I99	432 aa		4.2	□□□□□ -1.74
UBR1-209	ENST00000569243	C17orf80	Q9BSJ5	609 aa		4.2	□□□□□ -1.74
UBR1-209	ENST00000569243	TRIM5	Q9C035	493 aa		4.2	□□□□□ -1.74
UBR1-209	ENST00000569243	ASIC5	Q9NY37	505 aa		4.2	□□□□□ -1.74
UBR1-209	ENST00000569243	CPA4	Q9UI42	421 aa		4.2	□□□□□ -1.74
UBR1-209	ENST00000569243	MAFF	Q9ULX9	164 aa		4.2	□□□□□ -1.74
UBR1-209	ENST00000569243	FAM90A10P	A6NDY2	464 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	AP4M1	O00189	453 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	BTN3A1	O00481	513 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	GCAT	O75600	419 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	OAZ2	O95190	189 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	EPHA3	P29320	983 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	AGFG1	P52594	562 aa	Known RBP	4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	GHRHR	Q02643	423 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	CTBP1	Q13363	440 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	RAB32	Q13637	225 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	ZNF268	Q14587	947 aa	Predicted RBP	4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	LRRC41	Q15345	812 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	IFIT1B	Q5T764	474 aa	Known RBP	4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	ANO7	Q6IWH7	933 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	PTCHD4	Q6ZW05	846 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	DAAM2	Q86T65	1068 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	LIX1L	Q8IVB5	337 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	SPART	Q8N0X7	666 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	CELF5	Q8N6W0	485 aa	Known RBP	4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	GPATCH3	Q96I76	525 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	P2RX7	Q99572	595 aa	Known RBP	4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	ZNF518B	Q9C0D4	1074 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	ARMT1	Q9H993	441 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	NMRK2	Q9NPI5	230 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	AASDHPPT	Q9NRN7	309 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	SNX15	Q9NRS6	342 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	GABBR1	Q9UBS5	961 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243	IP6K2	Q9UHH9	426 aa		4.19	□□□□□ -1.74
UBR1-209	ENST00000569243		A0A1W2PPL8	197 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	MARCH6	O60337	910 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	CNOT3	O75175	753 aa	Known RBP	4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	UBXN7	O94888	489 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	HSPA6	P17066	643 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	NCL	P19338	710 aa	Known RBP	4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	EN2	P19622	333 aa	Predicted RBP	4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	FPR3	P25089	353 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	HTR1B	P28222	390 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	ALDH5A1	P51649	535 aa	Predicted RBP	4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	PRKAG1	P54619	331 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	LY6K	Q17RY6	165 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	INSC	Q1MX18	579 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	ANO6	Q4KMQ2	910 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	SHC4	Q6S5L8	630 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	SLC35G2	Q8TBE7	412 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	PNISR	Q8TF01	805 aa	Known RBP	4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	CTHRC1	Q96CG8	243 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	HOOK2	Q96ED9	719 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	SIGLEC11	Q96RL6	698 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	MMS19	Q96T76	1030 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	GBA2	Q9HCG7	927 aa	Predicted RBP	4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	A1CF	Q9NQ94	594 aa	Known RBP	4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	TXLNG	Q9NUQ3	528 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	KLHL13	Q9P2N7	655 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	USP22	Q9UPT9	525 aa		4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	DRG1	Q9Y295	367 aa	Known RBP	4.18	□□□□□ -1.74
UBR1-209	ENST00000569243	ZMYM2	Q9UBW7	1377 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	ANKRD62	A6NC57	917 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	PHGDH	O43175	533 aa	Known RBP	4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	CCP110	O43303	1012 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	AP1G1	O43747	822 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	TBC1D4	O60343	1298 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	RNF8	O76064	485 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	GAS8-AS1	O95177	125 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	NPR1	P16066	1061 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	PSG6	Q00889	435 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	LMAN2	Q12907	356 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	SLC13A2	Q13183	592 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	LARS2	Q15031	903 aa	Known RBP	4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	MLC1	Q15049	377 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	RBMS2	Q15434	407 aa	Known RBP	4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	B3GNT9	Q6UX72	402 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	IRF2BP2	Q7Z5L9	587 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	NRAC	Q8N912	160 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	EFHD1	Q9BUP0	239 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	VN1R3	Q9BXE9	311 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	DHX36	Q9H2U1	1008 aa	Known RBP	4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	SMURF2	Q9HAU4	748 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	CDY1	Q9Y6F8	540 aa		4.17	□□□□□ -1.74
UBR1-209	ENST00000569243	CES2	O00748	559 aa		4.16	□□□□□ -1.74
UBR1-209	ENST00000569243	TMPRSS11D	O60235	418 aa		4.16	□□□□□ -1.74
UBR1-209	ENST00000569243	TLR2	O60603	784 aa		4.16	□□□□□ -1.74
UBR1-209	ENST00000569243	CT47B1	P0C2W7	299 aa	Predicted RBP	4.16	□□□□□ -1.74
UBR1-209	ENST00000569243	PRF1	P14222	555 aa		4.16	□□□□□ -1.74
UBR1-209	ENST00000569243	TIRAP	P58753	221 aa		4.16	□□□□□ -1.74
UBR1-209	ENST00000569243	ZNF267	Q14586	743 aa	Predicted RBP	4.16	□□□□□ -1.74
UBR1-209	ENST00000569243	VSTM1	Q6UX27	236 aa		4.16	□□□□□ -1.74
UBR1-209	ENST00000569243	NGDN	Q8NEJ9	315 aa	Known RBP	4.16	□□□□□ -1.74
UBR1-209	ENST00000569243	MPLKIP	Q8TAP9	179 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms