RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 UBR7Q8N806 425 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 FBXL13Q8NEE6 735 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 PDZD8Q8NEN9 1154 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 ATP2A3Q93084 1043 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 SMARCE1Q969G3 411 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 FBXO32Q969P5 355 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 SLC35C1Q96A29 364 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 CCDC34Q96HJ3 373 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 FAXDC2Q96IV6 333 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 SLITRK1Q96PX8 696 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 HNRNPABQ99729 332 aaKnown RBP8.29□□□□□ -1.08
CDH3-209ENST00000569080 DUSP9Q99956 384 aaKnown RBP8.29□□□□□ -1.08
CDH3-209ENST00000569080 IMPG2Q9BZV3 1241 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 MMRN2Q9H8L6 949 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 PNPLA8Q9NP80 782 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 DUS2Q9NX74 493 aaKnown RBP8.29□□□□□ -1.08
CDH3-209ENST00000569080 SMPD4Q9NXE4 827 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 GMIPQ9P107 970 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 CIZ1Q9ULV3 898 aaPredicted RBP8.29□□□□□ -1.08
CDH3-209ENST00000569080 COQ4Q9Y3A0 265 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 CPQQ9Y646 472 aa8.29□□□□□ -1.08
CDH3-209ENST00000569080 GOLGA6L4A6NEF3 574 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 ANTXRLA6NF34 631 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 CHURC1-FNTBB4DL54 471 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 SCAMP3O14828 347 aaKnown RBP8.28□□□□□ -1.08
CDH3-209ENST00000569080 GREM1O60565 184 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 CLSTN1O94985 981 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 SMC2O95347 1197 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 EGFP01133 1207 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 CYP17A1P05093 508 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 FAM200BP0CF97 657 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 CD58P19256 250 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 YWHAQP27348 245 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 ADORA2BP29275 332 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 HOXA6P31267 233 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 OPRD1P41143 372 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 CXCL12P48061 93 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 IFNAR2P48551 515 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 MAP3K7CLP57077 242 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 FKBP3Q00688 224 aaKnown RBP8.28□□□□□ -1.08
CDH3-209ENST00000569080 MESP2Q0VG99 397 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 MORC3Q14149 939 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 DCAF17Q5H9S7 520 aaPredicted RBP8.28□□□□□ -1.08
CDH3-209ENST00000569080 PPP1R26Q5T8A7 1209 aaPredicted RBP8.28□□□□□ -1.08
CDH3-209ENST00000569080 CC2D1AQ6P1N0 951 aaPredicted RBP8.28□□□□□ -1.08
CDH3-209ENST00000569080 FOXR2Q6PJQ5 311 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 FILIP1Q7Z7B0 1213 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 SLC4A11Q8NBS3 891 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 WBP2Q969T9 261 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 MED10Q9BTT4 135 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 NT5C1AQ9BXI3 368 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 LINC00597Q9H2U6 94 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 CCSER2Q9H7U1 834 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 NMUR1Q9HB89 426 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 CYLDQ9NQC7 956 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 CISHQ9NSE2 258 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 COMMD8Q9NX08 183 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 OSER1Q9NX31 292 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 RAB20Q9NX57 234 aa8.28□□□□□ -1.08
CDH3-209ENST00000569080 SMG5Q9UPR3 1016 aaKnown RBP8.28□□□□□ -1.08
CDH3-209ENST00000569080 ATG2BQ96BY7 2078 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 MYOFQ9NZM1 2061 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 PPP1R3GB7ZBB8 358 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 PSMA7O14818 248 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 CYP26A1O43174 497 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 RNF40O75150 1001 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 NFATC1O95644 943 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 TGM1P22735 817 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 GALK1P51570 392 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 RAD23BP54727 409 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 GRSF1Q12849 480 aaKnown RBP eCLIP8.27□□□□□ -1.09
CDH3-209ENST00000569080 ARHGAP17Q68EM7 881 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 C12orf40Q86WS4 652 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 DDX42Q86XP3 938 aaKnown RBP eCLIP8.27□□□□□ -1.09
CDH3-209ENST00000569080 SFTPA1Q8IWL2 248 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 DCLK2Q8N568 766 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 TTC16Q8NEE8 873 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 ATRIPQ8WXE1 791 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 RUBCNQ92622 972 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 TATDN2Q93075 761 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 CYFIP2Q96F07 1278 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 DHTKD1Q96HY7 919 aaPredicted RBP8.27□□□□□ -1.09
CDH3-209ENST00000569080 TSG101Q99816 390 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 P2RY13Q9BPV8 354 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 GTPBP4Q9BZE4 634 aaKnown RBP8.27□□□□□ -1.09
CDH3-209ENST00000569080 FAM124BQ9H5Z6 455 aaPredicted RBP8.27□□□□□ -1.09
CDH3-209ENST00000569080 POLR3BQ9NW08 1133 aaPredicted RBP8.27□□□□□ -1.09
CDH3-209ENST00000569080 CFAP97Q9P2B7 532 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 ARMCX3Q9UH62 379 aaPredicted RBP8.27□□□□□ -1.09
CDH3-209ENST00000569080 CHORDC1Q9UHD1 332 aaPredicted RBP8.27□□□□□ -1.09
CDH3-209ENST00000569080 SCML2Q9UQR0 700 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 USP3Q9Y6I4 520 aa8.27□□□□□ -1.09
CDH3-209ENST00000569080 E2F8A0AVK6 867 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 PMM2O15305 246 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 HRO43593 1189 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 STX10O60499 249 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 TLR5O60602 858 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 ABL1P00519 1130 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 MBL2P11226 248 aaPredicted RBP8.26□□□□□ -1.09
CDH3-209ENST00000569080 DRD1P21728 446 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms