RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 HARSP12081 509 aaKnown RBP12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 CD44P16070 742 aaKnown RBP12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 GAP43P17677 238 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 KIR2DL1P43626 348 aaPredicted RBP12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 NPTX2P47972 431 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 SLC6A11P48066 632 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 ATXN3P54252 364 aaPredicted RBP12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 DMP1Q13316 513 aaPredicted RBP12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 PPP2R5AQ15172 486 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 MGAT5BQ3V5L5 792 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 SLC39A12Q504Y0 691 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 SDHAF4Q5VUM1 108 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 CC2D1AQ6P1N0 951 aaPredicted RBP12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 TXNDC5Q8NBS9 432 aaKnown RBP12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 BAHD1Q8TBE0 780 aaPredicted RBP12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 WHAMMQ8TF30 809 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 NOC3LQ8WTT2 800 aaKnown RBP12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 HSD3B7Q9H2F3 369 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 TMLHEQ9NVH6 421 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 PCOLCE2Q9UKZ9 415 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 HCN2Q9UL51 889 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 CTNND2Q9UQB3 1225 aa12.75□□□□□ -0.37
VPS9D1-207ENST00000568691 CITO14578 2027 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 PHLPP2Q6ZVD8 1323 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 TTC26A0AVF1 554 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 KLF8O95600 359 aaPredicted RBP12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 GUCY2CP25092 1073 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 PRCPP42785 496 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 TUFMP49411 452 aaKnown RBP12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 LRRC63Q05C16 580 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 ZNF33AQ06730 810 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 MAPK7Q13164 816 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 SLC14A1Q13336 389 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 FAM26FQ5R3K3 315 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 CDKAL1Q5VV42 579 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 MPZL3Q6UWV2 235 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 ZNF605Q86T29 641 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 USP37Q86T82 979 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 C12orf40Q86WS4 652 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 KIAA0895Q8NCT3 520 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 CEP76Q8TAP6 659 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 PIP4K2CQ8TBX8 421 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 HMGB4Q8WW32 186 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 NELFBQ8WX92 580 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 ATP2A3Q93084 1043 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 TRIM44Q96DX7 344 aaPredicted RBP12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 SENP8Q96LD8 212 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 GCNAQ96QF7 691 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 BHMT2Q9H2M3 363 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 TMEM134Q9H6X4 195 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 CD93Q9NPY3 652 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 OLFML3Q9NRN5 406 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 PANK4Q9NVE7 773 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 GCNT4Q9P109 453 aa12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 KIAA1522Q9P206 1035 aaPredicted RBP12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 GOLGA4Q13439 2230 aaKnown RBP12.74□□□□□ -0.37
VPS9D1-207ENST00000568691 ARHGEF35A5YM69 484 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 PYCARD-AS1I3L0S3 204 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 AP5Z1O43299 807 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 TBCAO75347 108 aaKnown RBP12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 CYP11A1P05108 521 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 KRT18P05783 430 aaKnown RBP12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 ATXN1LP0C7T5 689 aaKnown RBP12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 IDEP14735 1019 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 DDX6P26196 483 aaKnown RBP eCLIP12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 ZNF131P52739 623 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 LILRA4P59901 499 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 MRPS21P82921 87 aaKnown RBP12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 VEPH1Q14D04 833 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 ARSHQ5FYA8 562 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 KLHL10Q6JEL2 608 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 DSTYKQ6XUX3 929 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 DYMQ7RTS9 669 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 SMYD4Q8IYR2 804 aaPredicted RBP12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 ANKRD20A12PQ8NF67 263 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 SPACA7Q96KW9 195 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 REEP2Q9BRK0 252 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 MRPL4Q9BYD3 311 aaKnown RBP12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 IL21RQ9HBE5 538 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 CD248Q9HCU0 757 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 ZMYM5Q9UJ78 669 aa12.73□□□□□ -0.37
VPS9D1-207ENST00000568691 IGHV1OR15-9A0A0B4J2B8 117 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 TCRBV21S2A2A0A5A6 115 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 FAM149AA5PLN7 773 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 J3QKU1 62 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 EIF3DO15371 548 aaKnown RBP eCLIP12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 FGFR1OPO95684 399 aaKnown RBP12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 GABRG2P18507 467 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 TIE1P35590 1138 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 TNFSF9P41273 254 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 DPP6P42658 865 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 IFNAR2P48551 515 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 PEX3P56589 373 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 FANCCQ00597 558 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 BNC1Q01954 994 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 RPL6Q02878 288 aaKnown RBP12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 STK4Q13043 487 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 TPD52L1Q16890 204 aaPredicted RBP12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 BMT2Q1RMZ1 405 aa12.72□□□□□ -0.37
VPS9D1-207ENST00000568691 RINT1Q6NUQ1 792 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms