RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 MAML3Q96JK9 1138 aa10.08□□□□□ -0.8
TCF4-240ENST00000568673 MRPL45Q9BRJ2 306 aaKnown RBP10.08□□□□□ -0.8
TCF4-240ENST00000568673 DHRS4Q9BTZ2 278 aa10.08□□□□□ -0.8
TCF4-240ENST00000568673 SLC4A5Q9BY07 1137 aa10.08□□□□□ -0.8
TCF4-240ENST00000568673 PITPNM3Q9BZ71 974 aa10.08□□□□□ -0.8
TCF4-240ENST00000568673 GCOM2Q9BZD3 368 aaPredicted RBP10.08□□□□□ -0.8
TCF4-240ENST00000568673 RAB6CQ9H0N0 254 aa10.08□□□□□ -0.8
TCF4-240ENST00000568673 CXCL16Q9H2A7 254 aa10.08□□□□□ -0.8
TCF4-240ENST00000568673 ACSS3Q9H6R3 686 aa10.08□□□□□ -0.8
TCF4-240ENST00000568673 KIF9Q9HAQ2 790 aa10.08□□□□□ -0.8
TCF4-240ENST00000568673 SETD4Q9NVD3 440 aa10.08□□□□□ -0.8
TCF4-240ENST00000568673 SNTG2Q9NY99 539 aa10.08□□□□□ -0.8
TCF4-240ENST00000568673 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.08□□□□□ -0.8
TCF4-240ENST00000568673 CCL15-CCL14A0A0B4J2E2 113 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 TYROBPO43914 113 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 GTF2A2P52657 109 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 SNX16P57768 344 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 BASP1P80723 227 aaKnown RBP10.07□□□□□ -0.8
TCF4-240ENST00000568673 ATP11AP98196 1134 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 SLC6A3Q01959 620 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 GRB14Q14449 540 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 CCL15Q16663 113 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 KLHL38Q2WGJ6 581 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 GALNTL6Q49A17 601 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 IQSEC1Q6DN90 963 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 ADGRD1Q6QNK2 874 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 NPNTQ6UXI9 565 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 RGS9BPQ6ZS82 235 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 VSIG1Q86XK7 387 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 ZDHHC17Q8IUH5 632 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 SCUBE3Q8IX30 993 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 C4orf33Q8N1A6 199 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 TAB3Q8N5C8 712 aaPredicted RBP10.07□□□□□ -0.8
TCF4-240ENST00000568673 LRRC52Q8N7C0 313 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 OR6J1Q8NGC5 347 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.07□□□□□ -0.8
TCF4-240ENST00000568673 STK32AQ8WU08 396 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 TEKT4Q8WW24 435 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 USP6NLQ92738 828 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 KHSRPQ92945 711 aaKnown RBP eCLIP10.07□□□□□ -0.82e-6■■■□□ 17.4
TCF4-240ENST00000568673 MRRFQ96E11 262 aaKnown RBP10.07□□□□□ -0.8
TCF4-240ENST00000568673 SNX27Q96L92 541 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 TBCBQ99426 244 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 NCAPGQ9BPX3 1015 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 PAIP2Q9BPZ3 127 aaKnown RBP10.07□□□□□ -0.8
TCF4-240ENST00000568673 WDR83Q9BRX9 315 aaKnown RBP10.07□□□□□ -0.8
TCF4-240ENST00000568673 TINF2Q9BSI4 451 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 SSU72Q9NP77 194 aaKnown RBP10.07□□□□□ -0.8
TCF4-240ENST00000568673 HAUS2Q9NVX0 235 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 GINS2Q9Y248 185 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 SCN1AP35498 2009 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 TRIP11Q15643 1979 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 A0A1W2PPM1 405 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 PPEF2O14830 753 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 GPR32O75388 356 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 ATP2A2P16615 1042 aaKnown RBP10.07□□□□□ -0.8
TCF4-240ENST00000568673 KRT4P19013 534 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 CA4P22748 312 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 SDC4P31431 198 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 RPA3P35244 121 aaPredicted RBP10.07□□□□□ -0.8
TCF4-240ENST00000568673 YARSP54577 528 aaKnown RBP10.07□□□□□ -0.8
TCF4-240ENST00000568673 RNASELQ05823 741 aaKnown RBP10.07□□□□□ -0.8
TCF4-240ENST00000568673 TMEM62Q0P6H9 643 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 KRT81Q14533 505 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 PCBP1Q15365 356 aaKnown RBP eCLIP10.07□□□□□ -0.8
TCF4-240ENST00000568673 ZKSCAN8Q15776 578 aaPredicted RBP10.07□□□□□ -0.8
TCF4-240ENST00000568673 FAM133BQ5BKY9 247 aaKnown RBP10.07□□□□□ -0.8
TCF4-240ENST00000568673 CGB2Q6NT52 195 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 SCYL2Q6P3W7 929 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 CYB5D1Q6P9G0 228 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 ALKAL1Q6UXT8 129 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 CATSPER4Q7RTX7 472 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 ANKRD23Q86SG2 305 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 UNC93AQ86WB7 457 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 PLD5Q8N7P1 536 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 BEST2Q8NFU1 509 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 FBF1Q8TES7 1133 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 FAM172AQ8WUF8 416 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 USP29Q9HBJ7 922 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 KLHL14Q9P2G3 628 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 HESX1Q9UBX0 185 aa10.07□□□□□ -0.8
TCF4-240ENST00000568673 PAPSS1O43252 624 aaPredicted RBP10.06□□□□□ -0.8
TCF4-240ENST00000568673 UBOX5O94941 541 aa10.06□□□□□ -0.8
TCF4-240ENST00000568673 DESP17661 470 aa10.06□□□□□ -0.8
TCF4-240ENST00000568673 TGM2P21980 687 aa10.06□□□□□ -0.8
TCF4-240ENST00000568673 NRLP54845 237 aa10.06□□□□□ -0.8
TCF4-240ENST00000568673 CBLBQ13191 982 aa10.06□□□□□ -0.8
TCF4-240ENST00000568673 PDK4Q16654 411 aa10.06□□□□□ -0.8
TCF4-240ENST00000568673 BBS9Q3SYG4 887 aa10.06□□□□□ -0.8
TCF4-240ENST00000568673 NOTUMQ6P988 496 aa10.06□□□□□ -0.8
TCF4-240ENST00000568673 SESTD1Q86VW0 696 aa10.06□□□□□ -0.8
TCF4-240ENST00000568673 BRI3BPQ8WY22 251 aa10.06□□□□□ -0.8
TCF4-240ENST00000568673 PAFAH2Q99487 392 aa10.06□□□□□ -0.8
TCF4-240ENST00000568673 SYT17Q9BSW7 474 aa10.06□□□□□ -0.8
TCF4-240ENST00000568673 EIF2AQ9BY44 585 aaKnown RBP10.06□□□□□ -0.8
TCF4-240ENST00000568673 FAM49AQ9H0Q0 323 aaPredicted RBP10.06□□□□□ -0.8
TCF4-240ENST00000568673 RXFP1Q9HBX9 757 aa10.06□□□□□ -0.8
TCF4-240ENST00000568673 NGRNQ9NPE2 291 aaKnown RBP10.06□□□□□ -0.8
TCF4-240ENST00000568673 FAM49BQ9NUQ9 324 aa10.06□□□□□ -0.8
TCF4-240ENST00000568673 TUBGCP4Q9UGJ1 667 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms