RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 EIF3CQ99613 913 aaKnown RBP8.91□□□□□ -0.98
SF3B3-212ENST00000568539 KCNF1Q9H3M0 494 aa8.91□□□□□ -0.98
SF3B3-212ENST00000568539 IGFLR1Q9H665 355 aa8.91□□□□□ -0.98
SF3B3-212ENST00000568539 CYLDQ9NQC7 956 aa8.91□□□□□ -0.98
SF3B3-212ENST00000568539 ST7Q9NRC1 585 aa8.91□□□□□ -0.98
SF3B3-212ENST00000568539 ZDHHC7Q9NXF8 308 aa8.91□□□□□ -0.98
SF3B3-212ENST00000568539 TJP2Q9UDY2 1190 aa8.91□□□□□ -0.98
SF3B3-212ENST00000568539 DPP7Q9UHL4 492 aa8.91□□□□□ -0.98
SF3B3-212ENST00000568539 EPN1Q9Y6I3 576 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-212ENST00000568539 USP3Q9Y6I4 520 aa8.91□□□□□ -0.98
SF3B3-212ENST00000568539 VWA8A3KMH1 1905 aa8.91□□□□□ -0.98
SF3B3-212ENST00000568539 NLRC5Q86WI3 1866 aa8.91□□□□□ -0.98
SF3B3-212ENST00000568539 SLC38A8A6NNN8 435 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 TMCO5BA8MYB1 307 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 E5RJQ4 531 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 LINC01565O15544 149 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 ARHGAP6O43182 974 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 RFPL2O75678 378 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 PAPLNO95428 1278 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 LRG1P02750 347 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 FTLP02792 175 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-212ENST00000568539 ERBB2P04626 1255 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 POU2F2P09086 479 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 HNRNPA1P09651 372 aaKnown RBP eCLIP8.9□□□□□ -0.98
SF3B3-212ENST00000568539 ACADSBP45954 432 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 GABRB2P47870 512 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 TKTL1P51854 596 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 EPHB3P54753 998 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 USP46P62068 366 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 PLD1Q13393 1074 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 ADAM15Q13444 863 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 MTMR3Q13615 1198 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 COL19A1Q14993 1142 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 VEPH1Q14D04 833 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 CTC1Q2NKJ3 1217 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 C2CD6Q53TS8 623 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 PPM1LQ5SGD2 360 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 ELMSAN1Q6PJG2 1045 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 MMS22LQ6ZRQ5 1243 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 DENND5BQ6ZUT9 1274 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 ERICH1Q86X53 443 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 DNAAF5Q86Y56 855 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 MCOLN2Q8IZK6 566 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 NUP93Q8N1F7 819 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 SCML4Q8N228 414 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 MSANTD4Q8NCY6 345 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 SCAMP5Q8TAC9 235 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 IPO4Q8TEX9 1081 aaKnown RBP8.9□□□□□ -0.98
SF3B3-212ENST00000568539 MYLIPQ8WY64 445 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 CASP10Q92851 521 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 VCPIP1Q96JH7 1222 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 ZNF830Q96NB3 372 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-212ENST00000568539 CDX2Q99626 313 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-212ENST00000568539 TTLL2Q9BWV7 592 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 LRRC4Q9HBW1 653 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 DZANK1Q9NVP4 752 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 COMMD8Q9NX08 183 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 IL37Q9NZH6 218 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 REXO2Q9Y3B8 237 aaKnown RBP8.9□□□□□ -0.98
SF3B3-212ENST00000568539 ASB3Q9Y575 518 aa8.9□□□□□ -0.98
SF3B3-212ENST00000568539 NCANO14594 1321 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 FAM92AA1XBS5 289 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 PIK3R2O00459 728 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 SNPHO15079 494 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 CCL16O15467 120 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 PAPSS1O43252 624 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-212ENST00000568539 NRDCO43847 1150 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 RTN3O95197 1032 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-212ENST00000568539 CALB1P05937 261 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 CSH1P0DML2 217 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 CSH2P0DML3 217 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 LCP1P13796 627 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 HMGA1P17096 107 aaKnown RBP8.89□□□□□ -0.99
SF3B3-212ENST00000568539 GALCP54803 685 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 GSCP56915 257 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-212ENST00000568539 SNX16P57768 344 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 ADIGQ0VDE8 80 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 SPA17Q15506 151 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 C10orf76Q5T2E6 689 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 CYP4A22Q5TCH4 519 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 PM20D1Q6GTS8 502 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 OLFML1Q6UWY5 402 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 TOGARAM2Q6ZUX3 1019 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 BHLHA9Q7RTU4 235 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 DNAJB7Q7Z6W7 309 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-212ENST00000568539 ITIH5Q86UX2 942 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 XYLT1Q86Y38 959 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 ZDHHC17Q8IUH5 632 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 SCUBE3Q8IX30 993 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 SIX6OS1Q8N1H7 587 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 ACRBPQ8NEB7 543 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 CMASQ8NFW8 434 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-212ENST00000568539 MAFAQ8NHW3 353 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-212ENST00000568539 CLEC4CQ8WTT0 213 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 PSMG2Q969U7 264 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 ZNF707Q96C28 371 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-212ENST00000568539 C18orf8Q96DM3 657 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 MCRS1Q96EZ8 462 aa8.89□□□□□ -0.99
SF3B3-212ENST00000568539 TRMT2BQ96GJ1 504 aaKnown RBP8.89□□□□□ -0.99
SF3B3-212ENST00000568539 MYRFLQ96LU7 910 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms