RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 ERCC5P28715 1186 aaPredicted RBP13.67□□□□□ -0.22
TSC2-220ENST00000568238 GJA4P35212 333 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 FNTBP49356 437 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 DMWDQ09019 674 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 IFRD2Q12894 506 aaPredicted RBP13.67□□□□□ -0.22
TSC2-220ENST00000568238 TAF10Q12962 218 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 SGSM1Q2NKQ1 1148 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 CCDC40Q4G0X9 1142 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 HEATR6Q6AI08 1181 aaKnown RBP13.67□□□□□ -0.22
TSC2-220ENST00000568238 PRR23BQ6ZRT6 265 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 LONP2Q86WA8 852 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 NUP93Q8N1F7 819 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 TAF4BQ92750 862 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 ELMO3Q96BJ8 720 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 SMARCD1Q96GM5 515 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 CEP63Q96MT8 703 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 P2RY13Q9BPV8 354 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 MED10Q9BTT4 135 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 SDCBP2Q9H190 292 aa13.67□□□□□ -0.22
TSC2-220ENST00000568238 LEFTY2O00292 366 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 ATG13O75143 517 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 RNF40O75150 1001 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 ASS1P00966 412 aaKnown RBP13.66□□□□□ -0.22
TSC2-220ENST00000568238 OAS1P00973 400 aaKnown RBP13.66□□□□□ -0.22
TSC2-220ENST00000568238 EGFP01133 1207 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 CCDC192P0DO97 292 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 DRD1P21728 446 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 YWHAQP27348 245 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 HOXA6P31267 233 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 VAMP7P51809 220 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 SLC7A9P82251 487 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 FOXK2Q01167 660 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 TPD52L1Q16890 204 aaPredicted RBP13.66□□□□□ -0.22
TSC2-220ENST00000568238 ANO6Q4KMQ2 910 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 DCAF17Q5H9S7 520 aaPredicted RBP13.66□□□□□ -0.22
TSC2-220ENST00000568238 C1orf220Q5T0J3 134 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 LAIR1Q6GTX8 287 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 PKN3Q6P5Z2 889 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 FOXR2Q6PJQ5 311 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 INTS8Q75QN2 995 aaKnown RBP13.66□□□□□ -0.22
TSC2-220ENST00000568238 SV2AQ7L0J3 742 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 ACOT1Q86TX2 421 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 GPR161Q8N6U8 529 aaKnown RBP13.66□□□□□ -0.22
TSC2-220ENST00000568238 PDZD8Q8NEN9 1154 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 FBXO32Q969P5 355 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 RMDN1Q96DB5 314 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 SRRTQ9BXP5 876 aaKnown RBP13.66□□□□□ -0.22
TSC2-220ENST00000568238 IMPG2Q9BZV3 1241 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 MMRN2Q9H8L6 949 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 DMAP1Q9NPF5 467 aaPredicted RBP13.66□□□□□ -0.22
TSC2-220ENST00000568238 KRT82Q9NSB4 513 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 CPQQ9Y646 472 aa13.66□□□□□ -0.22
TSC2-220ENST00000568238 MYOFQ9NZM1 2061 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 AP1G2O75843 785 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 OLFM2O95897 454 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 HLA-DRAP01903 254 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 TRIM21P19474 475 aaKnown RBP13.65□□□□□ -0.22
TSC2-220ENST00000568238 CNR2P34972 360 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 ASPAP45381 313 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 NDST1P52848 882 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 SLC5A3P53794 718 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 ZXDBP98169 803 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 ENPEPQ07075 957 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 NR1H3Q13133 447 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 SIM2Q14190 667 aaPredicted RBP13.65□□□□□ -0.22
TSC2-220ENST00000568238 LPAL2Q16609 132 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 FBXO43Q4G163 708 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 NAIF1Q69YI7 327 aaPredicted RBP13.65□□□□□ -0.22
TSC2-220ENST00000568238 SPOPLQ6IQ16 392 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 ERMP1Q7Z2K6 904 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 KIAA1958Q8N8K9 716 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 OVCA2Q8WZ82 227 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 CD101Q93033 1021 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 SMPD4Q9NXE4 827 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 HMGXB4Q9UGU5 601 aa13.65□□□□□ -0.22
TSC2-220ENST00000568238 ARMCX3Q9UH62 379 aaPredicted RBP13.65□□□□□ -0.22
TSC2-220ENST00000568238 FGFR1OPO95684 399 aaKnown RBP13.64□□□□□ -0.23
TSC2-220ENST00000568238 MBL2P11226 248 aaPredicted RBP13.64□□□□□ -0.23
TSC2-220ENST00000568238 CCDC130P13994 396 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 GCLMP48507 274 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 GALK1P51570 392 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 SRSF5Q13243 272 aaKnown RBP13.64□□□□□ -0.23
TSC2-220ENST00000568238 ORC1Q13415 861 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 HSP90AA4PQ58FG1 418 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 CT47A1Q5JQC4 288 aaPredicted RBP13.64□□□□□ -0.23
TSC2-220ENST00000568238 TCERG1LQ5VWI1 586 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 PAQR9Q6ZVX9 377 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.64□□□□□ -0.23
TSC2-220ENST00000568238 FILIP1Q7Z7B0 1213 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 WDR5BQ86VZ2 330 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 UNC93AQ86WB7 457 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 DDX42Q86XP3 938 aaKnown RBP eCLIP13.64□□□□□ -0.23
TSC2-220ENST00000568238 CREBRFQ8IUR6 639 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 FUKQ8N0W3 1084 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 SLC2A14Q8TDB8 520 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 CNOT6LQ96LI5 555 aaKnown RBP13.64□□□□□ -0.23
TSC2-220ENST00000568238 KCNK16Q96T55 309 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 FUCA2Q9BTY2 467 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 RNF38Q9H0F5 515 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 LINC00597Q9H2U6 94 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms