RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 TMEM233B4DJY2 109 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 MARCH6O60337 910 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 SRGAP2O75044 1071 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 ABLIM3O94929 683 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 NPR1P16066 1061 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 NEK2P51955 445 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 ITGA8P53708 1063 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 ID2Q02363 134 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 ANO7Q6IWH7 933 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 RANBP10Q6VN20 620 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 DCDC5Q6ZRR9 648 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 PIM3Q86V86 326 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 ANKRD13BQ86YJ7 626 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 DENND1CQ8IV53 801 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 MAFAQ8NHW3 353 aaPredicted RBP4.07□□□□□ -1.76
CDH1-211ENST00000567320 ZCRB1Q8TBF4 217 aaKnown RBP4.07□□□□□ -1.76
CDH1-211ENST00000567320 KBTBD7Q8WVZ9 684 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 HOOK2Q96ED9 719 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 NT5C1BQ96P26 610 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 SIGLEC11Q96RL6 698 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 TRIM54Q9BYV2 358 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 MGAT4CQ9UBM8 478 aa4.07□□□□□ -1.76
CDH1-211ENST00000567320 CACNA1IQ9P0X4 2223 aa4.06□□□□□ -1.76
CDH1-211ENST00000567320 CRYABP02511 175 aaKnown RBP4.06□□□□□ -1.76
CDH1-211ENST00000567320 ME1P48163 572 aa4.06□□□□□ -1.76
CDH1-211ENST00000567320 DIO1P49895 249 aa4.06□□□□□ -1.76
CDH1-211ENST00000567320 KCNB1Q14721 858 aa4.06□□□□□ -1.76
CDH1-211ENST00000567320 MIDNQ504T8 468 aa4.06□□□□□ -1.76
CDH1-211ENST00000567320 TMTC4Q5T4D3 741 aa4.06□□□□□ -1.76
CDH1-211ENST00000567320 VSTM1Q6UX27 236 aa4.06□□□□□ -1.76
CDH1-211ENST00000567320 ACRBPQ8NEB7 543 aa4.06□□□□□ -1.76
CDH1-211ENST00000567320 NGDNQ8NEJ9 315 aaKnown RBP4.06□□□□□ -1.76
CDH1-211ENST00000567320 DIS3LQ8TF46 1054 aaKnown RBP4.06□□□□□ -1.76
CDH1-211ENST00000567320 ADGRE3Q9BY15 652 aa4.06□□□□□ -1.76
CDH1-211ENST00000567320 MAFFQ9ULX9 164 aa4.06□□□□□ -1.76
CDH1-211ENST00000567320 LY6G6EA0A0G2JKS1 128 aa4.05□□□□□ -1.76
CDH1-211ENST00000567320 RASSF9O75901 435 aa4.05□□□□□ -1.76
CDH1-211ENST00000567320 UBXN7O94888 489 aa4.05□□□□□ -1.76
CDH1-211ENST00000567320 ALPLP05186 524 aa4.05□□□□□ -1.76
CDH1-211ENST00000567320 PSG1P11464 419 aa4.05□□□□□ -1.76
CDH1-211ENST00000567320 HSPA6P17066 643 aa4.05□□□□□ -1.76
CDH1-211ENST00000567320 EPHA3P29320 983 aa4.05□□□□□ -1.76
CDH1-211ENST00000567320 BCAT1P54687 386 aa4.05□□□□□ -1.76
CDH1-211ENST00000567320 LARS2Q15031 903 aaKnown RBP4.05□□□□□ -1.76
CDH1-211ENST00000567320 INSCQ1MX18 579 aa4.05□□□□□ -1.76
CDH1-211ENST00000567320 DCAF12L1Q5VU92 463 aa4.05□□□□□ -1.76
CDH1-211ENST00000567320 COLCA1Q6ZS62 124 aa4.05□□□□□ -1.76
CDH1-211ENST00000567320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.05□□□□□ -1.76
CDH1-211ENST00000567320 PNISRQ8TF01 805 aaKnown RBP4.05□□□□□ -1.76
CDH1-211ENST00000567320 VCPIP1Q96JH7 1222 aa4.05□□□□□ -1.76
CDH1-211ENST00000567320 ZBTB45Q96K62 511 aaPredicted RBP4.05□□□□□ -1.76
CDH1-211ENST00000567320 PPP1R9BQ96SB3 815 aa4.05□□□□□ -1.76
CDH1-211ENST00000567320 ZMAT3Q9HA38 289 aaKnown RBP4.05□□□□□ -1.76
CDH1-211ENST00000567320 ZMYM2Q9UBW7 1377 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.04□□□□□ -1.76
CDH1-211ENST00000567320 TMPRSS11DO60235 418 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 OAZ2O95190 189 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 MYBP10242 640 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 APEHP13798 732 aaKnown RBP4.04□□□□□ -1.76
CDH1-211ENST00000567320 IBSPP21815 317 aaPredicted RBP4.04□□□□□ -1.76
CDH1-211ENST00000567320 SLC7A1P30825 629 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 UQCRC1P31930 480 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 RPS13P62277 151 aaKnown RBP4.04□□□□□ -1.76
CDH1-211ENST00000567320 TWIST1Q15672 202 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 TMEM63BQ5T3F8 832 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 LIX1LQ8IVB5 337 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 ZNF548Q8NEK5 533 aaPredicted RBP4.04□□□□□ -1.76
CDH1-211ENST00000567320 PPP1R35Q8TAP8 253 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 ZNF398Q8TD17 642 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 VN1R3Q9BXE9 311 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 SLC12A5Q9H2X9 1139 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 TCF7L1Q9HCS4 588 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 NMRK2Q9NPI5 230 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 HEY2Q9UBP5 337 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 HDAC9Q9UKV0 1011 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 HS3ST3B1Q9Y662 390 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 CDY1Q9Y6F8 540 aa4.04□□□□□ -1.76
CDH1-211ENST00000567320 B4DGG1 531 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 EXOC5O00471 708 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 CPA2P48052 419 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 YPEL5P62699 121 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 HTRA4P83105 476 aaPredicted RBP4.03□□□□□ -1.76
CDH1-211ENST00000567320 STK3Q13188 491 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 STIM1Q13586 685 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 SEMA3AQ14563 771 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 MFSD13AQ14CX5 517 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 SEC23BQ15437 767 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 SLC9C1Q4G0N8 1177 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 ZDHHC24Q6UX98 284 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 KCTD20Q7Z5Y7 419 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 SPSB4Q96A44 273 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 MARK4Q96L34 752 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 ACO2Q99798 780 aaKnown RBP4.03□□□□□ -1.76
CDH1-211ENST00000567320 ZNF518BQ9C0D4 1074 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 FAM234AQ9H0X4 552 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 USP29Q9HBJ7 922 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 A1CFQ9NQ94 594 aaKnown RBP4.03□□□□□ -1.76
CDH1-211ENST00000567320 SACM1LQ9NTJ5 587 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 GABBR1Q9UBS5 961 aa4.03□□□□□ -1.76
CDH1-211ENST00000567320 LRP12Q9Y561 859 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms