RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 ICE2Q659A1 982 aa10.02□□□□□ -0.81
NIFKP4-201ENST00000567275 SWSAP1Q6NVH7 229 aa10.02□□□□□ -0.81
NIFKP4-201ENST00000567275 DEFB132Q7Z7B7 95 aa10.02□□□□□ -0.81
NIFKP4-201ENST00000567275 SLC15A4Q8N697 577 aa10.02□□□□□ -0.81
NIFKP4-201ENST00000567275 DNAJC5GQ8N7S2 189 aa10.02□□□□□ -0.81
NIFKP4-201ENST00000567275 TTC8Q8TAM2 541 aa10.02□□□□□ -0.81
NIFKP4-201ENST00000567275 ALG8Q9BVK2 526 aa10.02□□□□□ -0.81
NIFKP4-201ENST00000567275 BRWD3Q6RI45 1802 aa10.02□□□□□ -0.81
NIFKP4-201ENST00000567275 SPATA31A5Q5VU36 1347 aa10.02□□□□□ -0.81
NIFKP4-201ENST00000567275 FRMPD2Q68DX3 1309 aaPredicted RBP10.02□□□□□ -0.81
NIFKP4-201ENST00000567275 SPATA31A7Q8IWB4 1347 aa10.02□□□□□ -0.81
NIFKP4-201ENST00000567275 ADGRA2Q96PE1 1338 aa10.02□□□□□ -0.81
NIFKP4-201ENST00000567275 KAT6AQ92794 2004 aa10.01□□□□□ -0.81
NIFKP4-201ENST00000567275 CLK3P49761 638 aaKnown RBP10.01□□□□□ -0.81
NIFKP4-201ENST00000567275 ARFIP2P53365 341 aa10.01□□□□□ -0.81
NIFKP4-201ENST00000567275 FAM109AQ8N4B1 249 aa10.01□□□□□ -0.81
NIFKP4-201ENST00000567275 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.01□□□□□ -0.81
NIFKP4-201ENST00000567275 PBKQ96KB5 322 aa10.01□□□□□ -0.81
NIFKP4-201ENST00000567275 CRAMP1Q96RY5 1269 aa10.01□□□□□ -0.81
NIFKP4-201ENST00000567275 PTDSS2Q9BVG9 487 aa10.01□□□□□ -0.81
NIFKP4-201ENST00000567275 PRDM11Q9NQV5 511 aa10.01□□□□□ -0.81
NIFKP4-201ENST00000567275 ATP7BP35670 1465 aa10.01□□□□□ -0.81
NIFKP4-201ENST00000567275 NRAPQ86VF7 1730 aa10.01□□□□□ -0.81
NIFKP4-201ENST00000567275 RAB3GAP2Q9H2M9 1393 aa10.01□□□□□ -0.81
NIFKP4-201ENST00000567275 A6NNZ2 444 aa10□□□□□ -0.81
NIFKP4-201ENST00000567275 MGST3O14880 152 aa10□□□□□ -0.81
NIFKP4-201ENST00000567275 CYP2C9P11712 490 aa10□□□□□ -0.81
NIFKP4-201ENST00000567275 XRCC6P12956 609 aaKnown RBP eCLIP10□□□□□ -0.81
NIFKP4-201ENST00000567275 NANOS3P60323 173 aaKnown RBP10□□□□□ -0.81
NIFKP4-201ENST00000567275 SLC13A2Q13183 592 aa10□□□□□ -0.81
NIFKP4-201ENST00000567275 CTBP1Q13363 440 aa10□□□□□ -0.81
NIFKP4-201ENST00000567275 GRM3Q14832 879 aa10□□□□□ -0.81
NIFKP4-201ENST00000567275 ARHGAP40Q5TG30 622 aa10□□□□□ -0.81
NIFKP4-201ENST00000567275 SRGAP1Q7Z6B7 1085 aa10□□□□□ -0.81
NIFKP4-201ENST00000567275 MPP5Q8N3R9 675 aa10□□□□□ -0.81
NIFKP4-201ENST00000567275 NGDNQ8NEJ9 315 aaKnown RBP10□□□□□ -0.81
NIFKP4-201ENST00000567275 SUCLG2Q96I99 432 aa10□□□□□ -0.81
NIFKP4-201ENST00000567275 C22orf23Q9BZE7 217 aa10□□□□□ -0.81
NIFKP4-201ENST00000567275 EHD3Q9NZN3 535 aa10□□□□□ -0.81
NIFKP4-201ENST00000567275 SLC17A6Q9P2U8 582 aa10□□□□□ -0.81
NIFKP4-201ENST00000567275 TPCN1Q9ULQ1 816 aa10□□□□□ -0.81
NIFKP4-201ENST00000567275 PARD3Q8TEW0 1356 aa10□□□□□ -0.81
NIFKP4-201ENST00000567275 VWC2LB2RUY7 222 aa9.99□□□□□ -0.81
NIFKP4-201ENST00000567275 EN2P19622 333 aaPredicted RBP9.99□□□□□ -0.81
NIFKP4-201ENST00000567275 CACNA2D1P54289 1103 aa9.99□□□□□ -0.81
NIFKP4-201ENST00000567275 EIF2B5Q13144 721 aaKnown RBP9.99□□□□□ -0.81
NIFKP4-201ENST00000567275 RAB32Q13637 225 aa9.99□□□□□ -0.81
NIFKP4-201ENST00000567275 GBX1Q14549 363 aa9.99□□□□□ -0.81
NIFKP4-201ENST00000567275 SLC44A4Q53GD3 710 aa9.99□□□□□ -0.81
NIFKP4-201ENST00000567275 APOA5Q6Q788 366 aa9.99□□□□□ -0.81
NIFKP4-201ENST00000567275 GRASPQ7Z6J2 395 aaPredicted RBP9.99□□□□□ -0.81
NIFKP4-201ENST00000567275 OBP2AQ9NY56 170 aa9.99□□□□□ -0.81
NIFKP4-201ENST00000567275 SERTAD3Q9UJW9 196 aa9.99□□□□□ -0.81
NIFKP4-201ENST00000567275 THSD7AQ9UPZ6 1657 aa9.99□□□□□ -0.81
NIFKP4-201ENST00000567275 POLR3AO14802 1390 aaPredicted RBP9.99□□□□□ -0.81
NIFKP4-201ENST00000567275 A0A087WWL8 130 aa9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 WDR27A2RRH5 827 aa9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 PPM1DO15297 605 aa9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 NR2F6P10588 404 aa9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 WNT3P56703 355 aa9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 TBCCQ15814 346 aa9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 KIAA0753Q2KHM9 967 aa9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 AKNAD1Q5T1N1 836 aa9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 TEDDM1Q5T9Z0 273 aa9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 RNF220Q5VTB9 566 aa9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 FAM156AQ8NDB6 213 aa9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 ATRIPQ8WXE1 791 aa9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 ANKS1AQ92625 1134 aa9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 DPH1Q9BZG8 443 aa9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 ALG13Q9NP73 1137 aaKnown RBP9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 SPATA31A1Q5TZJ5 1347 aa9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 BRD4O60885 1362 aaPredicted RBP9.98□□□□□ -0.81
NIFKP4-201ENST00000567275 RGPD1P0DJD0 1748 aa9.97□□□□□ -0.81
NIFKP4-201ENST00000567275 CRYBG1Q9Y4K1 1723 aa9.97□□□□□ -0.81
NIFKP4-201ENST00000567275 TBX3O15119 743 aa9.97□□□□□ -0.81
NIFKP4-201ENST00000567275 URI1O94763 535 aaPredicted RBP9.97□□□□□ -0.81
NIFKP4-201ENST00000567275 BRAFP15056 766 aa9.97□□□□□ -0.81
NIFKP4-201ENST00000567275 PPIFP30405 207 aaKnown RBP9.97□□□□□ -0.81
NIFKP4-201ENST00000567275 PTH2RP49190 550 aa9.97□□□□□ -0.81
NIFKP4-201ENST00000567275 KRT17Q04695 432 aa9.97□□□□□ -0.81
NIFKP4-201ENST00000567275 E2F2Q14209 437 aa9.97□□□□□ -0.81
NIFKP4-201ENST00000567275 DARS2Q6PI48 645 aaKnown RBP9.97□□□□□ -0.81
NIFKP4-201ENST00000567275 LRTOMTQ8WZ04 291 aa9.97□□□□□ -0.81
NIFKP4-201ENST00000567275 MS4A7Q9GZW8 240 aaPredicted RBP9.97□□□□□ -0.81
NIFKP4-201ENST00000567275 ZSCAN32Q9NX65 697 aa9.97□□□□□ -0.81
NIFKP4-201ENST00000567275 USP19O94966 1318 aa9.97□□□□□ -0.81
NIFKP4-201ENST00000567275 ITSN1Q15811 1721 aa9.96□□□□□ -0.81
NIFKP4-201ENST00000567275 LINC00473A8K010 186 aa9.96□□□□□ -0.82
NIFKP4-201ENST00000567275 MYO1FO00160 1098 aa9.96□□□□□ -0.82
NIFKP4-201ENST00000567275 TPP1O14773 563 aa9.96□□□□□ -0.82
NIFKP4-201ENST00000567275 FRS3O43559 492 aa9.96□□□□□ -0.82
NIFKP4-201ENST00000567275 TTLL1O95922 423 aa9.96□□□□□ -0.82
NIFKP4-201ENST00000567275 ZBED1O96006 694 aa9.96□□□□□ -0.82
NIFKP4-201ENST00000567275 PDHA1P08559 390 aa9.96□□□□□ -0.82
NIFKP4-201ENST00000567275 ZFXP17010 805 aaPredicted RBP9.96□□□□□ -0.82
NIFKP4-201ENST00000567275 LRPAP1P30533 357 aa9.96□□□□□ -0.82
NIFKP4-201ENST00000567275 SUMO3P55854 103 aaPredicted RBP9.96□□□□□ -0.82
NIFKP4-201ENST00000567275 PLAC9Q5JTB6 97 aa9.96□□□□□ -0.82
NIFKP4-201ENST00000567275 RGS7BPQ6MZT1 257 aaPredicted RBP9.96□□□□□ -0.82
NIFKP4-201ENST00000567275 CHST15Q7LFX5 561 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms