RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 FLRT2O43155 660 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 HOXC11O43248 304 aaPredicted RBP17.96■□□□□ 0.47
CDH3-205ENST00000566808 OAS1P00973 400 aaKnown RBP17.96■□□□□ 0.47
CDH3-205ENST00000566808 POLR2BP30876 1174 aaKnown RBP17.96■□□□□ 0.47
CDH3-205ENST00000566808 LHX1P48742 406 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 ZNF131P52739 623 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 GAD2Q05329 585 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 IL17AQ16552 155 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 ARSHQ5FYA8 562 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 LY6G5CQ5SRR4 150 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 C10orf76Q5T2E6 689 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 BTBD8Q5XKL5 378 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 SLFN12LQ6IEE8 588 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 LRRC52Q8N7C0 313 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 LSM14AQ8ND56 463 aaKnown RBP17.96■□□□□ 0.47
CDH3-205ENST00000566808 KIF2CQ99661 725 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 RNF38Q9H0F5 515 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 PARVGQ9HBI0 331 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 CD248Q9HCU0 757 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 DEC1Q9P2X7 70 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 PCDHB6Q9Y5E3 794 aa17.96■□□□□ 0.47
CDH3-205ENST00000566808 E2F8A0AVK6 867 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 GABRDO14764 452 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 TULP3O75386 442 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 FAM13AO94988 1023 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 ITGB3P05106 788 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 ANXA13P27216 316 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 USP46P62068 366 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 ST3GAL1Q11201 340 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 CAMK2BQ13554 666 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 FAM171BQ6P995 826 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 OSTM1Q86WC4 334 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 MYCT1Q8N699 235 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 TOP6BLQ8N6T0 577 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 PDCD7Q8N8D1 485 aaKnown RBP17.95■□□□□ 0.46
CDH3-205ENST00000566808 FBXO18Q8NFZ0 1043 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 PIP4K2CQ8TBX8 421 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 IPO4Q8TEX9 1081 aaKnown RBP17.95■□□□□ 0.46
CDH3-205ENST00000566808 CDK5RAP3Q96JB5 506 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 DCBLD2Q96PD2 775 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 GDAP2Q9NXN4 497 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 STARD13Q9Y3M8 1113 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 STYXL1Q9Y6J8 313 aa17.95■□□□□ 0.46
CDH3-205ENST00000566808 MEI4A8MW99 385 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 ANKRD63C9JTQ0 380 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 E9PAM4 449 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 TRAK2O60296 914 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 ATXN1LP0C7T5 689 aaKnown RBP17.94■□□□□ 0.46
CDH3-205ENST00000566808 MATKP42679 507 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 WASP42768 502 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 TOB1P50616 345 aaPredicted RBP17.94■□□□□ 0.46
CDH3-205ENST00000566808 NOP14P78316 857 aaKnown RBP17.94■□□□□ 0.46
CDH3-205ENST00000566808 GTF2BQ00403 316 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 MAPRE1Q15691 268 aaKnown RBP17.94■□□□□ 0.46
CDH3-205ENST00000566808 TMEM119Q4V9L6 283 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 IL27RAQ6UWB1 636 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 ZNF605Q86T29 641 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 MIB1Q86YT6 1006 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 CHPFQ8IZ52 775 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 ZCCHC9Q8N567 271 aaKnown RBP17.94■□□□□ 0.46
CDH3-205ENST00000566808 C1orf127Q8N9H9 656 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 DNASE2BQ8WZ79 361 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 MYLPFQ96A32 169 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 GAREM1Q9H706 876 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 TM7SF3Q9NS93 570 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 MAGEC2Q9UBF1 373 aaPredicted RBP17.94■□□□□ 0.46
CDH3-205ENST00000566808 AGAP1Q9UPQ3 857 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 FNDC3AQ9Y2H6 1198 aaKnown RBP17.94■□□□□ 0.46
CDH3-205ENST00000566808 PCDHGB2Q9Y5G2 931 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 RAI2Q9Y5P3 530 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 PTPN13Q12923 2485 aa17.94■□□□□ 0.46
CDH3-205ENST00000566808 MYH10P35580 1976 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 TMEM131Q92545 1883 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 TISP43B9A030 160 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 TRIM66O15016 1216 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 HCRTO43612 131 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 CILPO75339 1184 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 MBL2P11226 248 aaPredicted RBP17.93■□□□□ 0.46
CDH3-205ENST00000566808 GRIK1P39086 918 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 TFAMQ00059 246 aaKnown RBP17.93■□□□□ 0.46
CDH3-205ENST00000566808 EGFLAMQ63HQ2 1017 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 SDE2Q6IQ49 451 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 CRELD2Q6UXH1 353 aaPredicted RBP17.93■□□□□ 0.46
CDH3-205ENST00000566808 PLIN2Q99541 437 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 GABRG3Q99928 467 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 DUSP9Q99956 384 aaKnown RBP17.93■□□□□ 0.46
CDH3-205ENST00000566808 SYT15Q9BQS2 421 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 IL21RQ9HBE5 538 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 CD93Q9NPY3 652 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 ITGA11Q9UKX5 1188 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 HCN2Q9UL51 889 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 SNX9Q9Y5X1 595 aa17.93■□□□□ 0.46
CDH3-205ENST00000566808 ABL1P00519 1130 aa17.92■□□□□ 0.46
CDH3-205ENST00000566808 BDNFP23560 247 aa17.92■□□□□ 0.46
CDH3-205ENST00000566808 MAOBP27338 520 aa17.92■□□□□ 0.46
CDH3-205ENST00000566808 CD6P30203 668 aa17.92■□□□□ 0.46
CDH3-205ENST00000566808 GPBP1Q86WP2 473 aa17.92■□□□□ 0.46
CDH3-205ENST00000566808 MARCH9Q86YJ5 346 aa17.92■□□□□ 0.46
CDH3-205ENST00000566808 NAT16Q8N8M0 369 aa17.92■□□□□ 0.46
CDH3-205ENST00000566808 MRGPRX1Q96LB2 322 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms