RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 CCDC150Q8NCX0 1101 aa21.38■■□□□ 1.01
CLN6-207ENST00000566347 SCAMP5Q8TAC9 235 aa21.38■■□□□ 1.01
CLN6-207ENST00000566347 SLC2A14Q8TDB8 520 aa21.38■■□□□ 1.01
CLN6-207ENST00000566347 ACDQ96AP0 544 aa21.38■■□□□ 1.01
CLN6-207ENST00000566347 DNAI2Q9GZS0 605 aa21.38■■□□□ 1.01
CLN6-207ENST00000566347 CYP3A43Q9HB55 503 aa21.38■■□□□ 1.01
CLN6-207ENST00000566347 GDPD2Q9HCC8 539 aa21.38■■□□□ 1.01
CLN6-207ENST00000566347 MYH10P35580 1976 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 FAM92AA1XBS5 289 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 TRIM49P0CI25 452 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 TRIM49CP0CI26 452 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 CCDC130P13994 396 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 TGM1P22735 817 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 GCLMP48507 274 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 INCA1Q0VD86 236 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 RSPO4Q2I0M5 234 aaPredicted RBP21.37■■□□□ 1.01
CLN6-207ENST00000566347 EDRF1Q3B7T1 1238 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 ZCWPW2Q504Y3 356 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 RPLP0P6Q8NHW5 317 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 FBXO44Q9H4M3 255 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 CSNK1G1Q9HCP0 422 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 RMND1Q9NWS8 449 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 CFAP97Q9P2B7 532 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 TBC1D14Q9P2M4 693 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 HMGXB4Q9UGU5 601 aa21.37■■□□□ 1.01
CLN6-207ENST00000566347 CHORDC1Q9UHD1 332 aaPredicted RBP21.37■■□□□ 1.01
CLN6-207ENST00000566347 COCHO43405 550 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 CYP17A1P05093 508 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 FAM200BP0CF97 657 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 GTF2H1P32780 548 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 PPP3CAQ08209 521 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 SPEM2Q0P670 501 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 ORC1Q13415 861 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 SYT13Q7L8C5 426 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 ADGRG2Q8IZP9 1017 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 TAS1R2Q8TE23 839 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 GAB3Q8WWW8 586 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 EZH1Q92800 747 aaPredicted RBP21.36■■□□□ 1.01
CLN6-207ENST00000566347 SMOQ99835 787 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 NIF3L1Q9GZT8 377 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 TMEM8AQ9HCN3 771 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 PARD6AQ9NPB6 346 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 FAM49BQ9NUQ9 324 aa21.36■■□□□ 1.01
CLN6-207ENST00000566347 MYO16Q9Y6X6 1858 aa21.35■■□□□ 1.01
CLN6-207ENST00000566347 E2F8A0AVK6 867 aa21.35■■□□□ 1.01
CLN6-207ENST00000566347 GOLGA6L4A6NEF3 574 aa21.35■■□□□ 1.01
CLN6-207ENST00000566347 RPP40O75818 363 aaKnown RBP21.35■■□□□ 1.01
CLN6-207ENST00000566347 ADH1CP00326 375 aa21.35■■□□□ 1.01
CLN6-207ENST00000566347 ZDHHC11BP0C7U3 371 aa21.35■■□□□ 1.01
CLN6-207ENST00000566347 HOXC13P31276 330 aa21.35■■□□□ 1.01
CLN6-207ENST00000566347 OPRD1P41143 372 aa21.35■■□□□ 1.01
CLN6-207ENST00000566347 MCCD1P59942 119 aaPredicted RBP21.35■■□□□ 1.01
CLN6-207ENST00000566347 DHCR24Q15392 516 aa21.35■■□□□ 1.01
CLN6-207ENST00000566347 KRT39Q6A163 491 aa21.35■■□□□ 1.01
CLN6-207ENST00000566347 C12orf29Q8N999 325 aa21.35■■□□□ 1.01
CLN6-207ENST00000566347 ZMIZ2Q8NF64 920 aa21.35■■□□□ 1.01
CLN6-207ENST00000566347 OTUB2Q96DC9 234 aa21.35■■□□□ 1.01
CLN6-207ENST00000566347 HNRNPABQ99729 332 aaKnown RBP21.35■■□□□ 1.01
CLN6-207ENST00000566347 NT5C1AQ9BXI3 368 aa21.35■■□□□ 1.01
CLN6-207ENST00000566347 APOBEC3GQ9HC16 384 aaKnown RBP21.35■■□□□ 1.01
CLN6-207ENST00000566347 GMIPQ9P107 970 aa21.35■■□□□ 1.01
CLN6-207ENST00000566347 SPAG17Q6Q759 2223 aa21.35■■□□□ 1.01
CLN6-207ENST00000566347 KIAA1549LQ6ZVL6 1849 aa21.34■■□□□ 1.01
CLN6-207ENST00000566347 STX10O60499 249 aa21.34■■□□□ 1.01
CLN6-207ENST00000566347 FOXD2O60548 495 aaPredicted RBP21.34■■□□□ 1.01
CLN6-207ENST00000566347 EIF2DP41214 584 aaKnown RBP21.34■■□□□ 1.01
CLN6-207ENST00000566347 PXNP49023 591 aaPredicted RBP21.34■■□□□ 1.01
CLN6-207ENST00000566347 MAP3K7CLP57077 242 aa21.34■■□□□ 1.01
CLN6-207ENST00000566347 CACNA2D4Q7Z3S7 1137 aa21.34■■□□□ 1.01
CLN6-207ENST00000566347 FMR1NBQ8N0W7 255 aaPredicted RBP21.34■■□□□ 1.01
CLN6-207ENST00000566347 FAM160A2Q8N612 972 aaPredicted RBP21.34■■□□□ 1.01
CLN6-207ENST00000566347 FAXDC2Q96IV6 333 aa21.34■■□□□ 1.01
CLN6-207ENST00000566347 DUSP9Q99956 384 aaKnown RBP21.34■■□□□ 1.01
CLN6-207ENST00000566347 NACA2Q9H009 215 aa21.34■■□□□ 1.01
CLN6-207ENST00000566347 CCSER2Q9H7U1 834 aa21.34■■□□□ 1.01
CLN6-207ENST00000566347 MMRN2Q9H8L6 949 aa21.34■■□□□ 1.01
CLN6-207ENST00000566347 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.34■■□□□ 1.015e-7■■■■■ 90.8
CLN6-207ENST00000566347 TLR8Q9NR97 1041 aaKnown RBP21.34■■□□□ 1.01
CLN6-207ENST00000566347 CDV3Q9UKY7 258 aaKnown RBP21.34■■□□□ 1.01
CLN6-207ENST00000566347 RALGAPA1Q6GYQ0 2036 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 CETN3O15182 167 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 BEST1O76090 585 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 APBB3O95704 486 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 CCDC192P0DO97 292 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 EPB41P11171 864 aaKnown RBP21.33■■□□□ 1.01
CLN6-207ENST00000566347 ADORA2BP29275 332 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 NUCB2P80303 420 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 PNOCQ13519 176 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 DMC1Q14565 340 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 CSRP2Q16527 193 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 GAB4Q2WGN9 574 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 SMYD4Q8IYR2 804 aaPredicted RBP21.33■■□□□ 1.01
CLN6-207ENST00000566347 TTC39CQ8N584 583 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 CYFIP2Q96F07 1278 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 LOXL4Q96JB6 756 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 ZFRQ96KR1 1074 aaKnown RBP21.33■■□□□ 1.01
CLN6-207ENST00000566347 GSDMAQ96QA5 445 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 HHIPQ96QV1 700 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 TWNKQ96RR1 684 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 PNPLA8Q9NP80 782 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms