RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 SIRPGQ9P1W8 387 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 TAGLN3Q9UI15 199 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 LOC285556D6RIA3 1793 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 VWA5AO00534 786 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 ADCY3O60266 1144 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 FKBP6O75344 327 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 BANF1O75531 89 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 SNUPNO95149 360 aaKnown RBP22.5■■□□□ 1.19
SPSB3-208ENST00000566339 RBP3P10745 1247 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 PRKCHP24723 683 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 ROR1Q01973 937 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 FAAP100Q0VG06 881 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 STXBP5Q5T5C0 1151 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 TRMT1LQ7Z2T5 733 aaKnown RBP22.5■■□□□ 1.19
SPSB3-208ENST00000566339 RFX6Q8HWS3 928 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 UNC45BQ8IWX7 931 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 NRG4Q8WWG1 115 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 IL1RAPL1Q9NZN1 696 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 FBXO40Q9UH90 709 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 PLLPQ9Y342 182 aa22.5■■□□□ 1.19
SPSB3-208ENST00000566339 COL11A1P12107 1806 aaPredicted RBP22.49■■□□□ 1.19
SPSB3-208ENST00000566339 GLTPD2A6NH11 291 aa22.49■■□□□ 1.19
SPSB3-208ENST00000566339 LRRIQ4A6NIV6 560 aa22.49■■□□□ 1.19
SPSB3-208ENST00000566339 TM7SF2O76062 418 aa22.49■■□□□ 1.19
SPSB3-208ENST00000566339 BGNP21810 368 aa22.49■■□□□ 1.19
SPSB3-208ENST00000566339 RFC1P35251 1148 aaPredicted RBP22.49■■□□□ 1.19
SPSB3-208ENST00000566339 ARCQ7LC44 396 aa22.49■■□□□ 1.19
SPSB3-208ENST00000566339 TTC17Q96AE7 1141 aa22.49■■□□□ 1.19
SPSB3-208ENST00000566339 FAM84AQ96KN4 292 aa22.49■■□□□ 1.19
SPSB3-208ENST00000566339 FAM96AQ9H5X1 160 aa22.49■■□□□ 1.19
SPSB3-208ENST00000566339 DLGAP2Q9P1A6 1054 aa22.49■■□□□ 1.19
SPSB3-208ENST00000566339 CHMP2BQ9UQN3 213 aa22.49■■□□□ 1.19
SPSB3-208ENST00000566339 ANKRD33BA6NCL7 494 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 SPECC1L-ADORA2AF8WAN1 911 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 RNF8O76064 485 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 PYGBP11216 843 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 SERPINB9P50453 376 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 SH3BGRP55822 239 aaPredicted RBP22.48■■□□□ 1.19
SPSB3-208ENST00000566339 RPL26P61254 145 aaKnown RBP22.48■■□□□ 1.19
SPSB3-208ENST00000566339 AP2B1P63010 937 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 KBTBD12Q3ZCT8 623 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 TMCO4Q5TGY1 634 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 ARFGAP1Q8N6T3 406 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 KCTD6Q8NC69 237 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 ZBTB45Q96K62 511 aaPredicted RBP22.48■■□□□ 1.19
SPSB3-208ENST00000566339 TEPSINQ96N21 525 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 SRPK1Q96SB4 655 aaKnown RBP22.48■■□□□ 1.19
SPSB3-208ENST00000566339 MIS12Q9H081 205 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 FAM124BQ9H5Z6 455 aaPredicted RBP22.48■■□□□ 1.19
SPSB3-208ENST00000566339 ZNF302Q9NR11 478 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 ARHGEF4Q9NR80 690 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 ASNSD1Q9NWL6 643 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 MYH9P35579 1960 aaKnown RBP22.48■■□□□ 1.19
SPSB3-208ENST00000566339 KBTBD13C9JR72 458 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 WNT10BO00744 389 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 TOM1L1O75674 476 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 RGS20O76081 388 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 C1QAP02745 245 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 IL1R2P27930 398 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 GABRB2P47870 512 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 BASP1P80723 227 aaKnown RBP22.48■■□□□ 1.19
SPSB3-208ENST00000566339 GAD2Q05329 585 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 TRPC3Q13507 836 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 PTPN20Q4JDL3 420 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 MYLK4Q86YV6 388 aaPredicted RBP22.48■■□□□ 1.19
SPSB3-208ENST00000566339 E2F7Q96AV8 911 aa22.48■■□□□ 1.19
SPSB3-208ENST00000566339 MRPL4Q9BYD3 311 aaKnown RBP22.48■■□□□ 1.19
SPSB3-208ENST00000566339 FBXO6Q9NRD1 293 aaPredicted RBP22.48■■□□□ 1.19
SPSB3-208ENST00000566339 IGKV6D-21A0A0A0MT36 114 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 TCRBV7S3A2A0A539 114 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 SPDYE5A6NIY4 337 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 ENO4A6NNW6 628 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 GOLGA8RI6L899 631 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 OGTO15294 1046 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 FAM189A1O60320 539 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 KRT38O76015 456 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 TOMM70O94826 608 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 TRUB2O95900 331 aaKnown RBP22.47■■□□□ 1.19
SPSB3-208ENST00000566339 CST3P01034 146 aaPredicted RBP22.47■■□□□ 1.19
SPSB3-208ENST00000566339 CNTFP26441 200 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 SSTR3P32745 418 aaPredicted RBP22.47■■□□□ 1.19
SPSB3-208ENST00000566339 ACTR3P61158 418 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 WASHC5Q12768 1159 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 DPY19L2Q6NUT2 758 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 CYS1Q717R9 158 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 SCUBE1Q8IWY4 988 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 MCUQ8NE86 351 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 USP6NLQ92738 828 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 MCRS1Q96EZ8 462 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 ZWILCHQ9H900 591 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 PLA2G4CQ9UP65 541 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 PHIPQ8WWQ0 1821 aa22.47■■□□□ 1.19
SPSB3-208ENST00000566339 B2RBV5 119 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 SERPINA6P08185 405 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 MYL6P60660 151 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 YWHAGP61981 247 aaKnown RBP eCLIP22.46■■□□□ 1.19
SPSB3-208ENST00000566339 PSMC1P62191 440 aaKnown RBP22.46■■□□□ 1.19
SPSB3-208ENST00000566339 DYNLT1P63172 113 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 XIAPP98170 497 aa22.46■■□□□ 1.19
SPSB3-208ENST00000566339 ZBTB41Q5SVQ8 909 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms