RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 FAM126AQ9BYI3 521 aaPredicted RBP2.94□□□□□ -1.94
SMG1-212ENST00000566328 CNNM1Q9NRU3 951 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 GAR1Q9NY12 217 aaKnown RBP2.94□□□□□ -1.94
SMG1-212ENST00000566328 SELENONQ9NZV5 590 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 ATP8A1Q9Y2Q0 1164 aa2.94□□□□□ -1.94
SMG1-212ENST00000566328 IGLV5-39A0A0G2JS06 123 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 C4orf47A7E2U8 309 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 VNN1O95497 513 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 KCNA3P22001 575 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 PRKAR1BP31321 381 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 KCNJ4P48050 445 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 GUCY2FP51841 1108 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 UCP3P55916 312 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 PSG6Q00889 435 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 LMAN2Q12907 356 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 STIM1Q13586 685 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 MTMR1Q13613 665 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 CCNIQ14094 377 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 KCNB1Q14721 858 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 PTPN21Q16825 1174 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 PGS1Q32NB8 556 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 MANEAQ5SRI9 462 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 CC2D1BQ5T0F9 858 aaKnown RBP2.93□□□□□ -1.94
SMG1-212ENST00000566328 CERCAMQ5T4B2 595 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 ZNF280BQ86YH2 543 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 SPARTQ8N0X7 666 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 NGDNQ8NEJ9 315 aaKnown RBP2.93□□□□□ -1.94
SMG1-212ENST00000566328 MTMR8Q96EF0 704 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 CDK5RAP3Q96JB5 506 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 MEIS3Q99687 375 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 C17orf80Q9BSJ5 609 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 PCDHA6Q9UN73 950 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 USP22Q9UPT9 525 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 MED16Q9Y2X0 877 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.93□□□□□ -1.94
SMG1-212ENST00000566328 SNX14Q9Y5W7 946 aa2.93□□□□□ -1.94
SMG1-212ENST00000566328 FOXN3O00409 490 aaPredicted RBP2.92□□□□□ -1.94
SMG1-212ENST00000566328 TMPRSS11DO60235 418 aa2.92□□□□□ -1.94
SMG1-212ENST00000566328 USP12O75317 370 aa2.92□□□□□ -1.94
SMG1-212ENST00000566328 SYF2O95926 243 aaKnown RBP2.92□□□□□ -1.94
SMG1-212ENST00000566328 APEHP13798 732 aaKnown RBP2.92□□□□□ -1.94
SMG1-212ENST00000566328 TACR3P29371 465 aa2.92□□□□□ -1.94
SMG1-212ENST00000566328 IL6STP40189 918 aaPredicted RBP2.92□□□□□ -1.94
SMG1-212ENST00000566328 RECQLP46063 649 aaPredicted RBP2.92□□□□□ -1.94
SMG1-212ENST00000566328 CPA2P48052 419 aa2.92□□□□□ -1.94
SMG1-212ENST00000566328 SLC11A2P49281 568 aa2.92□□□□□ -1.94
SMG1-212ENST00000566328 MTHFSP49914 203 aa2.92□□□□□ -1.94
SMG1-212ENST00000566328 NKX6-1P78426 367 aaPredicted RBP2.92□□□□□ -1.94
SMG1-212ENST00000566328 MTX1Q13505 466 aa2.92□□□□□ -1.94
SMG1-212ENST00000566328 ODF1Q14990 250 aa2.92□□□□□ -1.94
SMG1-212ENST00000566328 ZNF585BQ52M93 769 aa2.92□□□□□ -1.94
SMG1-212ENST00000566328 GAS2L3Q86XJ1 694 aa2.92□□□□□ -1.94
SMG1-212ENST00000566328 PELI3Q8N2H9 469 aa2.92□□□□□ -1.94
SMG1-212ENST00000566328 LINC01465Q8N7H1 131 aa2.92□□□□□ -1.94
SMG1-212ENST00000566328 MAFAQ8NHW3 353 aaPredicted RBP2.92□□□□□ -1.94
SMG1-212ENST00000566328 PPP2R3CQ969Q6 453 aa2.92□□□□□ -1.94
SMG1-212ENST00000566328 PPP1R10Q96QC0 940 aaKnown RBP2.92□□□□□ -1.94
SMG1-212ENST00000566328 MRPL44Q9H9J2 332 aaKnown RBP2.92□□□□□ -1.94
SMG1-212ENST00000566328 SEMA4BQ9NPR2 832 aaPredicted RBP2.92□□□□□ -1.94
SMG1-212ENST00000566328 MGAT4CQ9UBM8 478 aa2.92□□□□□ -1.94
SMG1-212ENST00000566328 DRG1Q9Y295 367 aaKnown RBP2.92□□□□□ -1.94
SMG1-212ENST00000566328 SPEF1Q9Y4P9 236 aa2.92□□□□□ -1.94
SMG1-212ENST00000566328 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.92□□□□□ -1.94
SMG1-212ENST00000566328 SLC28A2O43868 658 aa2.91□□□□□ -1.94
SMG1-212ENST00000566328 POU2F2P09086 479 aa2.91□□□□□ -1.94
SMG1-212ENST00000566328 EPHA3P29320 983 aa2.91□□□□□ -1.94
SMG1-212ENST00000566328 DIO1P49895 249 aa2.91□□□□□ -1.94
SMG1-212ENST00000566328 BCAT1P54687 386 aa2.91□□□□□ -1.94
SMG1-212ENST00000566328 ZXDBP98169 803 aa2.91□□□□□ -1.94
SMG1-212ENST00000566328 SEC23BQ15437 767 aa2.91□□□□□ -1.94
SMG1-212ENST00000566328 ASIC2Q16515 512 aa2.91□□□□□ -1.94
SMG1-212ENST00000566328 FAM110CQ1W6H9 321 aa2.91□□□□□ -1.94
SMG1-212ENST00000566328 ZIK1Q3SY52 487 aaPredicted RBP2.91□□□□□ -1.94
SMG1-212ENST00000566328 AWAT1Q58HT5 328 aa2.91□□□□□ -1.94
SMG1-212ENST00000566328 LMBRD2Q68DH5 695 aaPredicted RBP2.91□□□□□ -1.94
SMG1-212ENST00000566328 BPIFB1Q8TDL5 484 aa2.91□□□□□ -1.94
SMG1-212ENST00000566328 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
SMG1-212ENST00000566328 CCDC8Q9H0W5 538 aaPredicted RBP2.91□□□□□ -1.94
SMG1-212ENST00000566328 GBA2Q9HCG7 927 aaPredicted RBP2.91□□□□□ -1.94
SMG1-212ENST00000566328 PIH1D1Q9NWS0 290 aaKnown RBP2.91□□□□□ -1.94
SMG1-212ENST00000566328 MDFICQ9P1T7 246 aa2.91□□□□□ -1.94
SMG1-212ENST00000566328 CLIC1O00299 241 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 SNUPNO95149 360 aaKnown RBP2.9□□□□□ -1.95
SMG1-212ENST00000566328 ZRANB2O95218 330 aaKnown RBP eCLIP2.9□□□□□ -1.95
SMG1-212ENST00000566328 KRT10P13645 584 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 CREB1P16220 341 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 PGGT1BP53609 377 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 B4GALNT1Q00973 533 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 CFHR3Q02985 330 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 PFKFB3Q16875 520 aaPredicted RBP2.9□□□□□ -1.95
SMG1-212ENST00000566328 PLA1AQ53H76 456 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 DCAF12L1Q5VU92 463 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 GIMAP6Q6P9H5 292 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 GSG1LQ6UXU4 331 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 ZNF793Q6ZN11 406 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 SLC15A4Q8N697 577 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 DNAJC5GQ8N7S2 189 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 TMEM171Q8WVE6 324 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 SLC25A28Q96A46 364 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 HIC2Q96JB3 615 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms