RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 RXFP2Q8WXD0 754 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 IRGQQ8WZA9 623 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 NKD2Q969F2 451 aaPredicted RBP9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 NT5C3BQ969T7 300 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 SMARCD1Q96GM5 515 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 ZNF333Q96JL9 665 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 RTP3Q9BQQ7 232 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 TMEM175Q9BSA9 504 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 OXCT2Q9BYC2 517 aaPredicted RBP9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 MRPL9Q9BYD2 267 aaKnown RBP9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 B3GNT5Q9BYG0 378 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 CNGB3Q9NQW8 809 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 RRN3Q9NYV6 651 aa9.29□□□□□ -0.92
LSM3P5-201ENST00000566307 TCRBV7S2A1N4TA0A589 114 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 SASH3O75995 380 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 ECEL1O95672 775 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 GAS8O95995 478 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 POMCP01189 267 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 RALAP11233 206 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 KDELR1P24390 212 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 IL1R2P27930 398 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 HSPA9P38646 679 aaKnown RBP9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 MATKP42679 507 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 CARSP49589 748 aaKnown RBP9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 AIF1P55008 147 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 MRPS5P82675 430 aaKnown RBP9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 ADCY1Q08828 1119 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 ELAVL2Q12926 359 aaKnown RBP9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 GPS2Q13227 327 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 PTK6Q13882 451 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 MDH1BQ5I0G3 518 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 TTC27Q6P3X3 843 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 MFSD7Q6UXD7 560 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 CYP4V2Q6ZWL3 525 aaPredicted RBP9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 CTU1Q7Z7A3 348 aaKnown RBP9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 NPAS4Q8IUM7 802 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 MAP7D3Q8IWC1 876 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 KRT222Q8N1A0 295 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 LRRC45Q96CN5 670 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 FAF2Q96CS3 445 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 PGAP3Q96FM1 320 aaPredicted RBP9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 FUBP3Q96I24 572 aaKnown RBP eCLIP9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 SLC2A13Q96QE2 648 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 SLC9A7Q96T83 725 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 TRIM62Q9BVG3 475 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 TBC1D13Q9NVG8 400 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 TBX21Q9UL17 535 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 USP18Q9UMW8 372 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 USTQ9Y2C2 406 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 NEU2Q9Y3R4 380 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 PTPRDP23468 1912 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 PATJQ8NI35 1801 aa9.28□□□□□ -0.92
LSM3P5-201ENST00000566307 FAM170AA1A519 330 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 MYBPHLA2RUH7 354 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 LRRD1A4D1F6 860 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 HHLA1C9JL84 531 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 HCRTO43612 131 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 PRPSAP2O60256 369 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 ATP2C2O75185 946 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 TCF4P15884 667 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 NOS2P35228 1153 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 SSR1P43307 286 aaKnown RBP9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 RGS7P49802 495 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 ZNF135P52742 658 aaPredicted RBP9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 TSPY1Q01534 308 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 CAV1Q03135 178 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 FAAP100Q0VG06 881 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 SMARCB1Q12824 385 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 TFDP2Q14188 446 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 MRPL58Q14197 206 aaKnown RBP9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 SMC1AQ14683 1233 aaKnown RBP9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 SLC25A52Q3SY17 297 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 ODF2Q5BJF6 829 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 ALS2CLQ60I27 953 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 PM20D1Q6GTS8 502 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 OVOS1Q6IE37 1185 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 C4orf50Q6ZRC1 276 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 CCDC50Q8IVM0 306 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 CCDC105Q8IYK2 499 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 EMC1Q8N766 993 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 RNF169Q8NCN4 708 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 BBOF1Q8ND07 529 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 ZMIZ2Q8NF64 920 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 SLC35B2Q8TB61 432 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 RAPGEF5Q92565 580 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 PCED1BQ96HM7 432 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 PIWIL1Q96J94 861 aaKnown RBP9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 CASD1Q96PB1 797 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 SMOQ99835 787 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 PAAF1Q9BRP4 392 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 ZNF670Q9BS34 389 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 HERPUD2Q9BSE4 406 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 FOXP3Q9BZS1 431 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 TSPYL1Q9H0U9 437 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 HIPK3Q9H422 1215 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 LRRC4Q9HBW1 653 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 MED4Q9NPJ6 270 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 KRT82Q9NSB4 513 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 ZDHHC18Q9NUE0 388 aa9.27□□□□□ -0.93
LSM3P5-201ENST00000566307 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms