RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 CACNA2D4Q7Z3S7 1137 aa16.09■□□□□ 0.17
CMTM3-212ENST00000566121 RTKNQ9BST9 563 aa16.09■□□□□ 0.17
CMTM3-212ENST00000566121 UBXN6Q9BZV1 441 aa16.09■□□□□ 0.17
CMTM3-212ENST00000566121 SDCBP2Q9H190 292 aa16.09■□□□□ 0.17
CMTM3-212ENST00000566121 CPQQ9Y646 472 aa16.09■□□□□ 0.17
CMTM3-212ENST00000566121 WNT6Q9Y6F9 365 aa16.09■□□□□ 0.17
CMTM3-212ENST00000566121 CLDN5O00501 218 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 HLA-DRAP01903 254 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 OPRD1P41143 372 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 NDST1P52848 882 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 SLC5A3P53794 718 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 MRPS21P82921 87 aaKnown RBP16.08■□□□□ 0.16
CMTM3-212ENST00000566121 DHCR24Q15392 516 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 RSPO4Q2I0M5 234 aaPredicted RBP16.08■□□□□ 0.16
CMTM3-212ENST00000566121 PREPLQ4J6C6 727 aaPredicted RBP16.08■□□□□ 0.16
CMTM3-212ENST00000566121 PKN3Q6P5Z2 889 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 DGLUCYQ7Z3D6 616 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 C11orf74Q86VG3 221 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 ZC3H3Q8IXZ2 948 aaKnown RBP16.08■□□□□ 0.16
CMTM3-212ENST00000566121 SPRYD3Q8NCJ5 442 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 ZMIZ2Q8NF64 920 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 EZH1Q92800 747 aaPredicted RBP16.08■□□□□ 0.16
CMTM3-212ENST00000566121 FBXO32Q969P5 355 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 ZFRQ96KR1 1074 aaKnown RBP16.08■□□□□ 0.16
CMTM3-212ENST00000566121 GSDMAQ96QA5 445 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 KCNK16Q96T55 309 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 IMPG2Q9BZV3 1241 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 TMEM8AQ9HCN3 771 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 PARD6AQ9NPB6 346 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 RMND1Q9NWS8 449 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 SCML2Q9UQR0 700 aa16.08■□□□□ 0.16
CMTM3-212ENST00000566121 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.07■□□□□ 0.16
CMTM3-212ENST00000566121 K7EQS6 105 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 STX10O60499 249 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 AP1G2O75843 785 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 ADH1CP00326 375 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 CYP17A1P05093 508 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 KRT13P13646 458 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 TNFRSF4P43489 277 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 CEP135Q66GS9 1140 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 KRT39Q6A163 491 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 RHBDF2Q6PJF5 856 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 FOXR2Q6PJQ5 311 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 HTR3DQ70Z44 454 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 ACOT1Q86TX2 421 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 FAM186BQ8IYM0 893 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 NETO1Q8TDF5 533 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 USP33Q8TEY7 942 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 TIGD1Q96MW7 591 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 SMOQ99835 787 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 NT5C1AQ9BXI3 368 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 CYLDQ9NQC7 956 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 SEMA4GQ9NTN9 838 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 PCDHA5Q9Y5H7 936 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 HELZP42694 1942 aaKnown RBP16.07■□□□□ 0.16
CMTM3-212ENST00000566121 SDK1Q7Z5N4 2213 aa16.07■□□□□ 0.16
CMTM3-212ENST00000566121 EPG5Q9HCE0 2579 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 ACACBO00763 2458 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.06■□□□□ 0.16
CMTM3-212ENST00000566121 COCHO43405 550 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 CILPO75339 1184 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 APBB3O95704 486 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 PRR29P0C7W0 189 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 ZNF806P0C7X5 589 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 CHRM1P11229 460 aaPredicted RBP16.06■□□□□ 0.16
CMTM3-212ENST00000566121 PSEN1P49768 467 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 LIMK1P53667 647 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 NUCB2P80303 420 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 PPP3CAQ08209 521 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 FILIP1Q7Z7B0 1213 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 RASSF3Q86WH2 238 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 FMR1NBQ8N0W7 255 aaPredicted RBP16.06■□□□□ 0.16
CMTM3-212ENST00000566121 FAM160A2Q8N612 972 aaPredicted RBP16.06■□□□□ 0.16
CMTM3-212ENST00000566121 ENGASEQ8NFI3 743 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 SCAMP5Q8TAC9 235 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 SLC2A14Q8TDB8 520 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 NIF3L1Q9GZT8 377 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 GOLPH3LQ9H4A5 285 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 TLR8Q9NR97 1041 aaKnown RBP16.06■□□□□ 0.16
CMTM3-212ENST00000566121 CHORDC1Q9UHD1 332 aaPredicted RBP16.06■□□□□ 0.16
CMTM3-212ENST00000566121 COQ4Q9Y3A0 265 aa16.06■□□□□ 0.16
CMTM3-212ENST00000566121 LAMA1P25391 3075 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 HHLA1C9JL84 531 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 SLC30A4O14863 429 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 AXIN1O15169 862 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 CETN3O15182 167 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 PMM2O15305 246 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 HOXC11O43248 304 aaPredicted RBP16.05■□□□□ 0.16
CMTM3-212ENST00000566121 RPP40O75818 363 aaKnown RBP16.05■□□□□ 0.16
CMTM3-212ENST00000566121 EPN2O95208 641 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 FAM200BP0CF97 657 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 GRIA2P42262 883 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 ATXN1P54253 815 aaKnown RBP16.05■□□□□ 0.16
CMTM3-212ENST00000566121 DMC1Q14565 340 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 PLA2G2CQ5R387 149 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 PRR23BQ6ZRT6 265 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 CCDC150Q8NCX0 1101 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 RPLP0P6Q8NHW5 317 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 TAS1R2Q8TE23 839 aa16.05■□□□□ 0.16
CMTM3-212ENST00000566121 WHAMMQ8TF30 809 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms