RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 ATP2A3Q93084 1043 aa20.98■□□□□ 0.95
CMTM3-211ENST00000565922 CNOT6LQ96LI5 555 aaKnown RBP20.98■□□□□ 0.95
CMTM3-211ENST00000565922 DUS2Q9NX74 493 aaKnown RBP20.98■□□□□ 0.95
CMTM3-211ENST00000565922 KIAA1257Q9ULG3 409 aa20.98■□□□□ 0.95
CMTM3-211ENST00000565922 MTF2Q9Y483 593 aaPredicted RBP20.98■□□□□ 0.95
CMTM3-211ENST00000565922 FANCMQ8IYD8 2048 aa20.97■□□□□ 0.95
CMTM3-211ENST00000565922 SHISA7A6NL88 538 aa20.97■□□□□ 0.95
CMTM3-211ENST00000565922 ZDHHC11BP0C7U3 371 aa20.97■□□□□ 0.95
CMTM3-211ENST00000565922 MBL2P11226 248 aaPredicted RBP20.97■□□□□ 0.95
CMTM3-211ENST00000565922 ERCC5P28715 1186 aaPredicted RBP20.97■□□□□ 0.95
CMTM3-211ENST00000565922 GCNT1Q02742 428 aa20.97■□□□□ 0.95
CMTM3-211ENST00000565922 TNK2Q07912 1038 aa20.97■□□□□ 0.95
CMTM3-211ENST00000565922 CREBRFQ8IUR6 639 aa20.97■□□□□ 0.95
CMTM3-211ENST00000565922 JAKMIP2Q96AA8 810 aa20.97■□□□□ 0.95
CMTM3-211ENST00000565922 NACA2Q9H009 215 aa20.97■□□□□ 0.95
CMTM3-211ENST00000565922 EBF3Q9H4W6 596 aa20.97■□□□□ 0.95
CMTM3-211ENST00000565922 SPATA6Q9NWH7 488 aaPredicted RBP20.97■□□□□ 0.95
CMTM3-211ENST00000565922 GMIPQ9P107 970 aa20.97■□□□□ 0.95
CMTM3-211ENST00000565922 HESX1Q9UBX0 185 aa20.97■□□□□ 0.95
CMTM3-211ENST00000565922 CHORDC1Q9UHD1 332 aaPredicted RBP20.97■□□□□ 0.95
CMTM3-211ENST00000565922 SCML2Q9UQR0 700 aa20.97■□□□□ 0.95
CMTM3-211ENST00000565922 CPQQ9Y646 472 aa20.97■□□□□ 0.95
CMTM3-211ENST00000565922 CACNA1IQ9P0X4 2223 aa20.97■□□□□ 0.95
CMTM3-211ENST00000565922 CACNA1HO95180 2353 aa20.96■□□□□ 0.95
CMTM3-211ENST00000565922 LEFTY2O00292 366 aa20.96■□□□□ 0.95
CMTM3-211ENST00000565922 SLC9A3R1O14745 358 aaPredicted RBP20.96■□□□□ 0.95
CMTM3-211ENST00000565922 LAMTOR5O43504 91 aa20.96■□□□□ 0.95
CMTM3-211ENST00000565922 VDRP11473 427 aa20.96■□□□□ 0.95
CMTM3-211ENST00000565922 ACO1P21399 889 aaKnown RBP20.96■□□□□ 0.95
CMTM3-211ENST00000565922 PSEN1P49768 467 aa20.96■□□□□ 0.95
CMTM3-211ENST00000565922 NR1H3Q13133 447 aa20.96■□□□□ 0.95
CMTM3-211ENST00000565922 DPCR1Q3MIW9 517 aa20.96■□□□□ 0.95
CMTM3-211ENST00000565922 ANKRD52Q8NB46 1076 aa20.96■□□□□ 0.95
CMTM3-211ENST00000565922 EHBP1Q8NDI1 1231 aa20.96■□□□□ 0.95
CMTM3-211ENST00000565922 FAM81BQ96LP2 452 aa20.96■□□□□ 0.95
CMTM3-211ENST00000565922 UBXN6Q9BZV1 441 aa20.96■□□□□ 0.95
CMTM3-211ENST00000565922 RNF38Q9H0F5 515 aa20.96■□□□□ 0.95
CMTM3-211ENST00000565922 THAP9Q9H5L6 903 aa20.96■□□□□ 0.95
CMTM3-211ENST00000565922 HPS4Q9NQG7 708 aa20.96■□□□□ 0.95
CMTM3-211ENST00000565922 HHLA1C9JL84 531 aa20.95■□□□□ 0.94
CMTM3-211ENST00000565922 NFATC1O95644 943 aa20.95■□□□□ 0.94
CMTM3-211ENST00000565922 PAEPP09466 180 aa20.95■□□□□ 0.94
CMTM3-211ENST00000565922 CD19P15391 556 aa20.95■□□□□ 0.94
CMTM3-211ENST00000565922 SOX9P48436 509 aa20.95■□□□□ 0.94
CMTM3-211ENST00000565922 BCAT1P54687 386 aa20.95■□□□□ 0.94
CMTM3-211ENST00000565922 PPP2R5DQ14738 602 aa20.95■□□□□ 0.94
CMTM3-211ENST00000565922 DGKKQ5KSL6 1271 aa20.95■□□□□ 0.94
CMTM3-211ENST00000565922 TRIM68Q6AZZ1 485 aa20.95■□□□□ 0.94
CMTM3-211ENST00000565922 UBR7Q8N806 425 aa20.95■□□□□ 0.94
CMTM3-211ENST00000565922 TTC8Q8TAM2 541 aa20.95■□□□□ 0.94
CMTM3-211ENST00000565922 LMO3Q8TAP4 145 aa20.95■□□□□ 0.94
CMTM3-211ENST00000565922 RIN3Q8TB24 985 aa20.95■□□□□ 0.94
CMTM3-211ENST00000565922 CHRDQ9H2X0 955 aa20.95■□□□□ 0.94
CMTM3-211ENST00000565922 PCDHB4Q9Y5E5 795 aa20.95■□□□□ 0.94
CMTM3-211ENST00000565922 COCHO43405 550 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 TLR5O60602 858 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 MBD3O95983 291 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 PRKCSHP14314 528 aaPredicted RBP20.94■□□□□ 0.94
CMTM3-211ENST00000565922 MTIF2P46199 727 aaKnown RBP20.94■□□□□ 0.94
CMTM3-211ENST00000565922 KIF11P52732 1056 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 GOLGA8FQ08AF8 430 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 GOLGA8DPQ0D2H9 430 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 STILQ15468 1287 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 EML3Q32P44 896 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 TMEM270Q6UE05 265 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 GPRIN1Q7Z2K8 1008 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 CCDC186Q7Z3E2 898 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 TADA2BQ86TJ2 420 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 ZNF687Q8N1G0 1237 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 CDK5RAP1Q96SZ6 601 aaKnown RBP20.94■□□□□ 0.94
CMTM3-211ENST00000565922 ECT2Q9H8V3 914 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 LMAN1LQ9HAT1 526 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 SMPD4Q9NXE4 827 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 TBC1D14Q9P2M4 693 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 TSPAN16Q9UKR8 245 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 FBXO4Q9UKT5 387 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 WNT6Q9Y6F9 365 aa20.94■□□□□ 0.94
CMTM3-211ENST00000565922 CHRNB1P11230 501 aa20.93■□□□□ 0.94
CMTM3-211ENST00000565922 ARSAP15289 507 aa20.93■□□□□ 0.94
CMTM3-211ENST00000565922 FZD5Q13467 585 aa20.93■□□□□ 0.94
CMTM3-211ENST00000565922 GOLGA7BQ2TAP0 167 aa20.93■□□□□ 0.94
CMTM3-211ENST00000565922 ZC3H14Q6PJT7 736 aaKnown RBP20.93■□□□□ 0.94
CMTM3-211ENST00000565922 ENOSF1Q7L5Y1 443 aa20.93■□□□□ 0.94
CMTM3-211ENST00000565922 ARHGAP18Q8N392 663 aa20.93■□□□□ 0.94
CMTM3-211ENST00000565922 SYNPOQ8N3V7 929 aa20.93■□□□□ 0.94
CMTM3-211ENST00000565922 INTS2Q9H0H0 1204 aaKnown RBP20.93■□□□□ 0.94
CMTM3-211ENST00000565922 CCSER2Q9H7U1 834 aa20.93■□□□□ 0.94
CMTM3-211ENST00000565922 CYLDQ9NQC7 956 aa20.93■□□□□ 0.94
CMTM3-211ENST00000565922 SH3BP1Q9Y3L3 701 aa20.93■□□□□ 0.94
CMTM3-211ENST00000565922 USP3Q9Y6I4 520 aa20.93■□□□□ 0.94
CMTM3-211ENST00000565922 GTPBP10A4D1E9 387 aaKnown RBP20.92■□□□□ 0.94
CMTM3-211ENST00000565922 XPO1O14980 1071 aaKnown RBP20.92■□□□□ 0.94
CMTM3-211ENST00000565922 CYP26A1O43174 497 aa20.92■□□□□ 0.94
CMTM3-211ENST00000565922 SETSIPP0DME0 302 aa20.92■□□□□ 0.94
CMTM3-211ENST00000565922 ATP5C1P36542 298 aaKnown RBP20.92■□□□□ 0.94
CMTM3-211ENST00000565922 NBL1P41271 181 aa20.92■□□□□ 0.94
CMTM3-211ENST00000565922 BST2Q10589 180 aaKnown RBP20.92■□□□□ 0.94
CMTM3-211ENST00000565922 GRSF1Q12849 480 aaKnown RBP eCLIP20.92■□□□□ 0.94
CMTM3-211ENST00000565922 PON2Q15165 354 aa20.92■□□□□ 0.94
CMTM3-211ENST00000565922 KLHDC10Q6PID8 442 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms