RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 AP1G2O75843 785 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 MYL1P05976 194 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 MBL2P11226 248 aaPredicted RBP25.19■■□□□ 1.62
RAB40C-209ENST00000565511 PIK3CAP42336 1068 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 SLC6A11P48066 632 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 PPP3CCP48454 512 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 SEC13P55735 322 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 PPP3CAQ08209 521 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 DMC1Q14565 340 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 FBXO43Q4G163 708 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 KRBA2Q6ZNG9 492 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 PRR23CQ6ZRP0 262 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 GPRIN1Q7Z2K8 1008 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 SLC2A14Q8TDB8 520 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 SMARCD1Q96GM5 515 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 EHD2Q9NZN4 543 aa25.19■■□□□ 1.62
RAB40C-209ENST00000565511 CDV3Q9UKY7 258 aaKnown RBP25.19■■□□□ 1.62
RAB40C-209ENST00000565511 ATP8B3O60423 1300 aa25.18■■□□□ 1.62
RAB40C-209ENST00000565511 DCDC2BA2VCK2 349 aa25.18■■□□□ 1.62
RAB40C-209ENST00000565511 PRR5-ARHGAP8B1AHC4 643 aa25.18■■□□□ 1.62
RAB40C-209ENST00000565511 LRP3O75074 770 aa25.18■■□□□ 1.62
RAB40C-209ENST00000565511 RPP40O75818 363 aaKnown RBP25.18■■□□□ 1.62
RAB40C-209ENST00000565511 RTN3O95197 1032 aaPredicted RBP25.18■■□□□ 1.62
RAB40C-209ENST00000565511 ARHGAP8P85298 464 aa25.18■■□□□ 1.62
RAB40C-209ENST00000565511 DHCR24Q15392 516 aa25.18■■□□□ 1.62
RAB40C-209ENST00000565511 SGSM1Q2NKQ1 1148 aa25.18■■□□□ 1.62
RAB40C-209ENST00000565511 RHBDF2Q6PJF5 856 aa25.18■■□□□ 1.62
RAB40C-209ENST00000565511 SYT13Q7L8C5 426 aa25.18■■□□□ 1.62
RAB40C-209ENST00000565511 ADGRG2Q8IZP9 1017 aa25.18■■□□□ 1.62
RAB40C-209ENST00000565511 TAS1R2Q8TE23 839 aa25.18■■□□□ 1.62
RAB40C-209ENST00000565511 USP33Q8TEY7 942 aa25.18■■□□□ 1.62
RAB40C-209ENST00000565511 TNIP3Q96KP6 325 aa25.18■■□□□ 1.62
RAB40C-209ENST00000565511 CCDC163A0A0D9SF12 145 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 A0A1W2PQ27 194 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 A0A1W2PQ64 194 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 A0A1W2PQD8 194 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 DCLK1O15075 740 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 AXIN1O15169 862 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 CALUO43852 315 aaPredicted RBP25.17■■□□□ 1.62
RAB40C-209ENST00000565511 ZDHHC11BP0C7U3 371 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 NR2F2P24468 414 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 GCLMP48507 274 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 VAMP7P51809 220 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 NR1H3Q13133 447 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 CSRP2Q16527 193 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 ZCWPW2Q504Y3 356 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 SMYD4Q8IYR2 804 aaPredicted RBP25.17■■□□□ 1.62
RAB40C-209ENST00000565511 ABCA7Q8IZY2 2146 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 CRYBG2Q8N1P7 616 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 FRMD4BQ9Y2L6 1034 aa25.17■■□□□ 1.62
RAB40C-209ENST00000565511 MYO18AQ92614 2054 aaKnown RBP25.17■■□□□ 1.62
RAB40C-209ENST00000565511 FAM92AA1XBS5 289 aa25.16■■□□□ 1.62
RAB40C-209ENST00000565511 HNRNPLP14866 589 aaKnown RBP eCLIP25.16■■□□□ 1.62
RAB40C-209ENST00000565511 MAP3K7CLP57077 242 aa25.16■■□□□ 1.62
RAB40C-209ENST00000565511 NFIL3Q16649 462 aa25.16■■□□□ 1.62
RAB40C-209ENST00000565511 OVCA2Q8WZ82 227 aa25.16■■□□□ 1.62
RAB40C-209ENST00000565511 ARRDC1-AS1Q9H2J1 176 aa25.16■■□□□ 1.62
RAB40C-209ENST00000565511 SMOC1Q9H4F8 434 aa25.16■■□□□ 1.62
RAB40C-209ENST00000565511 GTF3C3Q9Y5Q9 886 aa25.16■■□□□ 1.62
RAB40C-209ENST00000565511 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.15■■□□□ 1.62
RAB40C-209ENST00000565511 IKBKBO14920 756 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 MAPK13O15264 365 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 EPN2O95208 641 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 CCDC192P0DO97 292 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 ADORA2BP29275 332 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 SF3A2Q15428 464 aaKnown RBP25.15■■□□□ 1.62
RAB40C-209ENST00000565511 C2orf27AQ580R0 203 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 SNX30Q5VWJ9 437 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 CACNA2D4Q7Z3S7 1137 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 CAMKK1Q8N5S9 505 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 PDZD8Q8NEN9 1154 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 WHAMMQ8TF30 809 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 TAF4BQ92750 862 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 EEF2KMTQ96G04 330 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 MMRN2Q9H8L6 949 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 CSNK1G1Q9HCP0 422 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 RXFP3Q9NSD7 469 aa25.15■■□□□ 1.62
RAB40C-209ENST00000565511 CNOT1A5YKK6 2376 aaKnown RBP25.14■■□□□ 1.62
RAB40C-209ENST00000565511 HHLA1C9JL84 531 aa25.14■■□□□ 1.62
RAB40C-209ENST00000565511 ZNF202O95125 648 aa25.14■■□□□ 1.62
RAB40C-209ENST00000565511 KDSRQ06136 332 aa25.14■■□□□ 1.62
RAB40C-209ENST00000565511 INCA1Q0VD86 236 aa25.14■■□□□ 1.62
RAB40C-209ENST00000565511 HECTD3Q5T447 861 aa25.14■■□□□ 1.62
RAB40C-209ENST00000565511 FAM186BQ8IYM0 893 aa25.14■■□□□ 1.62
RAB40C-209ENST00000565511 GUF1Q8N442 669 aaKnown RBP25.14■■□□□ 1.62
RAB40C-209ENST00000565511 CCDC33Q8N5R6 958 aa25.14■■□□□ 1.62
RAB40C-209ENST00000565511 JAKMIP2Q96AA8 810 aa25.14■■□□□ 1.62
RAB40C-209ENST00000565511 ACDQ96AP0 544 aa25.14■■□□□ 1.62
RAB40C-209ENST00000565511 ZDHHC4Q9NPG8 344 aa25.14■■□□□ 1.62
RAB40C-209ENST00000565511 OSER1Q9NX31 292 aa25.14■■□□□ 1.62
RAB40C-209ENST00000565511 APBB3O95704 486 aa25.13■■□□□ 1.61
RAB40C-209ENST00000565511 P4HA1P13674 534 aa25.13■■□□□ 1.61
RAB40C-209ENST00000565511 PLK5Q496M5 336 aa25.13■■□□□ 1.61
RAB40C-209ENST00000565511 LY6G5CQ5SRR4 150 aa25.13■■□□□ 1.61
RAB40C-209ENST00000565511 CLEC20AQ6ZU45 233 aa25.13■■□□□ 1.61
RAB40C-209ENST00000565511 UNC93AQ86WB7 457 aa25.13■■□□□ 1.61
RAB40C-209ENST00000565511 BBS7Q8IWZ6 715 aa25.13■■□□□ 1.61
RAB40C-209ENST00000565511 PHTF2Q8N3S3 785 aa25.13■■□□□ 1.61
RAB40C-209ENST00000565511 KIAA1958Q8N8K9 716 aa25.13■■□□□ 1.61
RAB40C-209ENST00000565511 SEMA4DQ92854 862 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms