RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TGM1P22735 817 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 GBP1P32455 592 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 TIE1P35590 1138 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 ATP5C1P36542 298 aaKnown RBP6.79□□□□□ -1.32
TCF4-228ENST00000565393 SLC5A3P53794 718 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 GAD2Q05329 585 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 PPP3CAQ08209 521 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 USP4Q13107 963 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 BECN1Q14457 450 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 CCDC6Q16204 474 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 ANO4Q32M45 955 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 AASDHQ4L235 1098 aaPredicted RBP6.79□□□□□ -1.32
TCF4-228ENST00000565393 ZNF394Q53GI3 561 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 USP39Q53GS9 565 aaKnown RBP6.79□□□□□ -1.32
TCF4-228ENST00000565393 EMC10Q5UCC4 262 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 NUDT18Q6ZVK8 323 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 KBTBD6Q86V97 674 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 FUKQ8N0W3 1084 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 PGBD3Q8N328 593 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 GUF1Q8N442 669 aaKnown RBP6.79□□□□□ -1.32
TCF4-228ENST00000565393 TSTD1Q8NFU3 115 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 USP33Q8TEY7 942 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 TMEM174Q8WUU8 243 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 GAB3Q8WWW8 586 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 OVCA2Q8WZ82 227 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 ACDQ96AP0 544 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 SMOQ99835 787 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 NT5C1AQ9BXI3 368 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 GOLPH3LQ9H4A5 285 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 FBXO44Q9H4M3 255 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 CCSER2Q9H7U1 834 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 CYP3A43Q9HB55 503 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 TLR8Q9NR97 1041 aaKnown RBP6.79□□□□□ -1.32
TCF4-228ENST00000565393 KRT82Q9NSB4 513 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 TMEM30AQ9NV96 361 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 GMIPQ9P107 970 aa6.79□□□□□ -1.32
TCF4-228ENST00000565393 NOTCH4Q99466 2003 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 FAM237AA0A1B0GTK4 181 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 MED19A0JLT2 244 aaPredicted RBP6.78□□□□□ -1.32
TCF4-228ENST00000565393 TNFRSF10BO14763 440 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 CETN3O15182 167 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 MAPK13O15264 365 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 ZBTB24O43167 697 aaPredicted RBP6.78□□□□□ -1.32
TCF4-228ENST00000565393 GDF9O60383 454 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 STX10O60499 249 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 FOXD2O60548 495 aaPredicted RBP6.78□□□□□ -1.32
TCF4-228ENST00000565393 LRP3O75074 770 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 ALDH1A2O94788 518 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 KAT7O95251 611 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 SMC2O95347 1197 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 KLF8O95600 359 aaPredicted RBP6.78□□□□□ -1.32
TCF4-228ENST00000565393 TBX18O95935 607 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 ASS1P00966 412 aaKnown RBP6.78□□□□□ -1.32
TCF4-228ENST00000565393 CYP17A1P05093 508 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 ADH5P11766 374 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 ACO1P21399 889 aaKnown RBP6.78□□□□□ -1.32
TCF4-228ENST00000565393 OPRD1P41143 372 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 GRIA2P42262 883 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 TNFRSF4P43489 277 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 ASPAP45381 313 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 PLA2G4AP47712 749 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 MRPS21P82921 87 aaKnown RBP6.78□□□□□ -1.32
TCF4-228ENST00000565393 CREB5Q02930 508 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 PNOCQ13519 176 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 SF3A2Q15428 464 aaKnown RBP6.78□□□□□ -1.32
TCF4-228ENST00000565393 ELF2Q15723 593 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 PREPLQ4J6C6 727 aaPredicted RBP6.78□□□□□ -1.32
TCF4-228ENST00000565393 LY6G5CQ5SRR4 150 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 C1orf220Q5T0J3 134 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 TCERG1LQ5VWI1 586 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 SNX30Q5VWJ9 437 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 KRT39Q6A163 491 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 IL31Q6EBC2 164 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 ISM2Q6H9L7 571 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 SDE2Q6IQ49 451 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 PRR23CQ6ZRP0 262 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 TPGS1Q6ZTW0 290 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 SMYD4Q8IYR2 804 aaPredicted RBP6.78□□□□□ -1.32
TCF4-228ENST00000565393 ALLCQ8N6M5 410 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 KIAA1958Q8N8K9 716 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 NETO1Q8TDF5 533 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 TAS1R2Q8TE23 839 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 EZH1Q92800 747 aaPredicted RBP6.78□□□□□ -1.32
TCF4-228ENST00000565393 LOXL4Q96JB6 756 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 HNRNPABQ99729 332 aaKnown RBP6.78□□□□□ -1.32
TCF4-228ENST00000565393 TSG101Q99816 390 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 RTKNQ9BST9 563 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 TPSD1Q9BZJ3 242 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 CSNK1G1Q9HCP0 422 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 ARHGEF4Q9NR80 690 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 RMND1Q9NWS8 449 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 IL37Q9NZH6 218 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 BCCIPQ9P287 314 aaKnown RBP eCLIP6.78□□□□□ -1.32
TCF4-228ENST00000565393 DEC1Q9P2X7 70 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 HMGXB4Q9UGU5 601 aa6.78□□□□□ -1.32
TCF4-228ENST00000565393 HOOK1Q9UJC3 728 aaKnown RBP6.78□□□□□ -1.32
TCF4-228ENST00000565393 C5orf42Q9H799 3197 aa6.77□□□□□ -1.32
TCF4-228ENST00000565393 A0A0A0MRY4 1105 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 A0A1W2PQH9 124 aa6.77□□□□□ -1.33
TCF4-228ENST00000565393 ANTXRLA6NF34 631 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms