RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 APEX2Q9UBZ4 518 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 LRWD1Q9UFC0 647 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 PGAP2Q9UHJ9 254 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 SLC45A1Q9Y2W3 748 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.53□□□□□ -1.36
PTPN9-204ENST00000564970 TESMINQ9Y4I5 508 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 CPQQ9Y646 472 aa6.53□□□□□ -1.36
PTPN9-204ENST00000564970 ZNF804BA4D1E1 1349 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 UBE4BO95155 1302 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 A0A0A6YYK5 440 aaPredicted RBP6.52□□□□□ -1.37
PTPN9-204ENST00000564970 PNMA6EA0A0J9YXQ4 647 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 TMEM238LA0A1B0GVL6 79 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 ESYT3A0FGR9 886 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 SAGE2PA6NJ88 616 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 PPP1R3GB7ZBB8 358 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 CLDN25C9JDP6 229 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 H0Y858 1186 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 TAF4O00268 1085 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 MSI1O43347 362 aaKnown RBP6.52□□□□□ -1.37
PTPN9-204ENST00000564970 CCNT2O60583 730 aaKnown RBP6.52□□□□□ -1.37
PTPN9-204ENST00000564970 TLR2O60603 784 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 DNAJB5O75953 348 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 CAMTA2O94983 1202 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 PGM3O95394 542 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 MOCS3O95396 460 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 P4HBP07237 508 aaKnown RBP6.52□□□□□ -1.37
PTPN9-204ENST00000564970 STMN1P16949 149 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 DCKP27707 260 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 PCSK6P29122 969 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 CDC27P30260 824 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 CASP2P42575 452 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 NAMPTP43490 491 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 ASMTP46597 345 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 SLC5A3P53794 718 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 TMBIM6P55061 237 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 PTENP60484 403 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 C1QTNF8P60827 252 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 CYP4F8P98187 520 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 IFITM2Q01629 132 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 EXOSC10Q01780 885 aaKnown RBP6.52□□□□□ -1.37
PTPN9-204ENST00000564970 FKBP4Q02790 459 aaKnown RBP eCLIP6.52□□□□□ -1.37
PTPN9-204ENST00000564970 ZBTB16Q05516 673 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 AP3B2Q13367 1082 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 TXNRD1Q16881 649 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 CERKLQ49MI3 558 aaPredicted RBP6.52□□□□□ -1.37
PTPN9-204ENST00000564970 ESCO2Q56NI9 601 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 VWA5B1Q5TIE3 1220 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 ATG16L1Q676U5 607 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 DUPD1Q68J44 220 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 ABRAXAS1Q6UWZ7 409 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 MACC1Q6ZN28 852 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 PIK3AP1Q6ZUJ8 805 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 ZNF767PQ75MW2 155 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 NT5DC4Q86YG4 428 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 TPH2Q8IWU9 490 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 ZSCAN29Q8IWY8 852 aaPredicted RBP6.52□□□□□ -1.37
PTPN9-204ENST00000564970 LINC00518Q8N0U6 118 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 LIX1Q8N485 282 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 METTL25Q8N6Q8 603 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 ARRDC4Q8NCT1 418 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 OR2W6PQ8NHA6 318 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 NCOA7Q8NI08 942 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 TEX47Q8TBZ9 253 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 TBC1D15Q8TC07 691 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 PPP4R1Q8TF05 950 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 TGFBRAP1Q8WUH2 860 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 C7orf43Q8WVR3 580 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 CAPSLQ8WWF8 208 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 B3GALT6Q96L58 329 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 MIPEPQ99797 713 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 ZNF717Q9BY31 904 aaPredicted RBP6.52□□□□□ -1.37
PTPN9-204ENST00000564970 ZNF341Q9BYN7 854 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 SLC6A15Q9H2J7 730 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 GOLPH3Q9H4A6 298 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 VPS37BQ9H9H4 285 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 SDHAF3Q9NRP4 125 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 PNPLA3Q9NST1 481 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 DTLQ9NZJ0 730 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 SFMBT1Q9UHJ3 866 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 GLS2Q9UI32 602 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 DAPK2Q9UIK4 370 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 CPSF3Q9UKF6 684 aaKnown RBP6.52□□□□□ -1.37
PTPN9-204ENST00000564970 HDAC9Q9UKV0 1011 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 PHTF1Q9UMS5 762 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 POLHQ9Y253 713 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 DTNAQ9Y4J8 743 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 SRPRBQ9Y5M8 271 aaKnown RBP6.52□□□□□ -1.37
PTPN9-204ENST00000564970 KLF2Q9Y5W3 355 aaPredicted RBP6.52□□□□□ -1.37
PTPN9-204ENST00000564970 SLC12A7Q9Y666 1083 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 IVNS1ABPQ9Y6Y0 642 aa6.52□□□□□ -1.37
PTPN9-204ENST00000564970 PCDH11YQ9BZA8 1340 aa6.51□□□□□ -1.37
PTPN9-204ENST00000564970 STK36Q9NRP7 1315 aa6.51□□□□□ -1.37
PTPN9-204ENST00000564970 DISP2A7MBM2 1401 aa6.51□□□□□ -1.37
PTPN9-204ENST00000564970 ABCC1P33527 1531 aa6.51□□□□□ -1.37
PTPN9-204ENST00000564970 C17orf113A0A1B0GUU1 675 aa6.51□□□□□ -1.37
PTPN9-204ENST00000564970 ESYT2A0FGR8 921 aa6.51□□□□□ -1.37
PTPN9-204ENST00000564970 SH3D21A4FU49 640 aa6.51□□□□□ -1.37
PTPN9-204ENST00000564970 PRSS44E7EML9 344 aa6.51□□□□□ -1.37
PTPN9-204ENST00000564970 STX16-NPEPL1H3BU86 382 aa6.51□□□□□ -1.37
PTPN9-204ENST00000564970 TRIM77I1YAP6 450 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms