RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 PADI6Q6TGC4 694 aa16.96■□□□□ 0.31
LINC00554-201ENST00000564841 DENND5BQ6ZUT9 1274 aa16.96■□□□□ 0.31
LINC00554-201ENST00000564841 DDX1Q92499 740 aaKnown RBP16.96■□□□□ 0.31
LINC00554-201ENST00000564841 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.96■□□□□ 0.31
LINC00554-201ENST00000564841 EIF3DO15371 548 aaKnown RBP eCLIP16.96■□□□□ 0.3
LINC00554-201ENST00000564841 LIASO43766 372 aa16.96■□□□□ 0.3
LINC00554-201ENST00000564841 TOP3BO95985 862 aaKnown RBP16.96■□□□□ 0.3
LINC00554-201ENST00000564841 ICAM1P05362 532 aa16.96■□□□□ 0.3
LINC00554-201ENST00000564841 TFPTP0C1Z6 253 aa16.96■□□□□ 0.3
LINC00554-201ENST00000564841 RAG1P15918 1043 aa16.96■□□□□ 0.3
LINC00554-201ENST00000564841 MXI1P50539 228 aa16.96■□□□□ 0.3
LINC00554-201ENST00000564841 ZNF280AP59817 542 aaPredicted RBP16.96■□□□□ 0.3
LINC00554-201ENST00000564841 BBS9Q3SYG4 887 aa16.96■□□□□ 0.3
LINC00554-201ENST00000564841 ZNF554Q86TJ5 538 aa16.96■□□□□ 0.3
LINC00554-201ENST00000564841 CBWD2Q8IUF1 395 aa16.96■□□□□ 0.3
LINC00554-201ENST00000564841 FBXO36Q8NEA4 188 aa16.96■□□□□ 0.3
LINC00554-201ENST00000564841 DCAKDQ8WVC6 231 aa16.96■□□□□ 0.3
LINC00554-201ENST00000564841 KCNH7Q9NS40 1196 aa16.96■□□□□ 0.3
LINC00554-201ENST00000564841 TAGLN3Q9UI15 199 aa16.96■□□□□ 0.3
LINC00554-201ENST00000564841 FOXD2O60548 495 aaPredicted RBP16.95■□□□□ 0.3
LINC00554-201ENST00000564841 SLC1A1P43005 524 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 PTGER2P43116 358 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 PEX3P56589 373 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 DYNLT1P63172 113 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 ANKRD20A4Q4UJ75 823 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 RNASEH2BQ5TBB1 312 aaKnown RBP16.95■□□□□ 0.3
LINC00554-201ENST00000564841 TXNRD3NBQ6F5E7 133 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 CENPUQ71F23 418 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 IGDCC3Q8IVU1 814 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 CNBD2Q96M20 576 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 CCDC28BQ9BUN5 200 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 TCEAL9Q9UHQ7 104 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 SLC24A2Q9UI40 661 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 SGK1O00141 431 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 CPOXP36551 454 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 MFSD7Q6UXD7 560 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 TSHZ1Q6ZSZ6 1077 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 ANKRD23Q86SG2 305 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 HPS6Q86YV9 775 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 ZBTB8BQ8NAP8 495 aaPredicted RBP16.95■□□□□ 0.3
LINC00554-201ENST00000564841 PRPF18Q99633 342 aaKnown RBP16.95■□□□□ 0.3
LINC00554-201ENST00000564841 C11orf70Q9BRQ4 267 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 BTBD7Q9P203 1132 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 INPP5FQ9Y2H2 1132 aa16.95■□□□□ 0.3
LINC00554-201ENST00000564841 LOC100653049A0A140TA62 436 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 TMEM221A6NGB7 291 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 KRT34O76011 436 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 ADRB2P07550 413 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 CIITAP33076 1130 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 STT3AP46977 705 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 GDF10P55107 478 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 HIF1AQ16665 826 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 TMEM259Q4ZIN3 620 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 EFHC1Q5JVL4 640 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 ADGRD1Q6QNK2 874 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 ERLEC1Q96DZ1 483 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 RMDN3Q96TC7 470 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 SLC13A1Q9BZW2 595 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 VPS33BQ9H267 617 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 FZD9O00144 591 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 WDR46O15213 610 aaKnown RBP16.94■□□□□ 0.3
LINC00554-201ENST00000564841 TRPA1O75762 1119 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 GAP43P17677 238 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 PSMD7P51665 324 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 TMPRSS15P98073 1019 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 CETN1Q12798 172 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 CYLC2Q14093 348 aaPredicted RBP16.94■□□□□ 0.3
LINC00554-201ENST00000564841 HIC1Q14526 733 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 KCTD21Q4G0X4 260 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 MCOLN2Q8IZK6 566 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 SHC3Q92529 594 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 DOLKQ9UPQ8 538 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 TELO2Q9Y4R8 837 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 RGPD3A6NKT7 1758 aaPredicted RBP16.94■□□□□ 0.3
LINC00554-201ENST00000564841 RGPD4Q7Z3J3 1758 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 NELFEP18615 380 aaKnown RBP16.94■□□□□ 0.3
LINC00554-201ENST00000564841 STIP1P31948 543 aaKnown RBP16.94■□□□□ 0.3
LINC00554-201ENST00000564841 MSX2P35548 267 aaPredicted RBP16.94■□□□□ 0.3
LINC00554-201ENST00000564841 RPL5P46777 297 aaKnown RBP16.94■□□□□ 0.3
LINC00554-201ENST00000564841 BAATQ14032 418 aaPredicted RBP16.94■□□□□ 0.3
LINC00554-201ENST00000564841 CCDC142Q17RM4 750 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 SNRNP48Q6IEG0 339 aaKnown RBP16.94■□□□□ 0.3
LINC00554-201ENST00000564841 MOXD1Q6UVY6 613 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 TAS1R2Q8TE23 839 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 CLEC4DQ8WXI8 215 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 CCDC106Q9BWC9 280 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 SENP6Q9GZR1 1112 aaPredicted RBP16.94■□□□□ 0.3
LINC00554-201ENST00000564841 ZDHHC7Q9NXF8 308 aa16.94■□□□□ 0.3
LINC00554-201ENST00000564841 TBX3O15119 743 aa16.93■□□□□ 0.3
LINC00554-201ENST00000564841 TM9SF1O15321 606 aa16.93■□□□□ 0.3
LINC00554-201ENST00000564841 PROCP04070 461 aa16.93■□□□□ 0.3
LINC00554-201ENST00000564841 RPS12P25398 132 aaKnown RBP16.93■□□□□ 0.3
LINC00554-201ENST00000564841 NCKAP1LP55160 1127 aa16.93■□□□□ 0.3
LINC00554-201ENST00000564841 CLEC16AQ2KHT3 1053 aa16.93■□□□□ 0.3
LINC00554-201ENST00000564841 MIER3Q7Z3K6 550 aa16.93■□□□□ 0.3
LINC00554-201ENST00000564841 MRPL1Q9BYD6 325 aaKnown RBP16.93■□□□□ 0.3
LINC00554-201ENST00000564841 EHMT1Q9H9B1 1298 aa16.93■□□□□ 0.3
LINC00554-201ENST00000564841 PFDN4Q9NQP4 134 aa16.93■□□□□ 0.3
LINC00554-201ENST00000564841 XPNPEP1Q9NQW7 623 aa16.93■□□□□ 0.3
LINC00554-201ENST00000564841 TUBGCP4Q9UGJ1 667 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms