RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 DRG1Q9Y295 367 aaKnown RBP5.27□□□□□ -1.57
CHD9-212ENST00000564641 CEP164Q9UPV0 1460 aa5.26□□□□□ -1.57
CHD9-212ENST00000564641 CES2O00748 559 aa5.26□□□□□ -1.57
CHD9-212ENST00000564641 CCP110O43303 1012 aa5.26□□□□□ -1.57
CHD9-212ENST00000564641 AKAP10O43572 662 aa5.26□□□□□ -1.57
CHD9-212ENST00000564641 PDGFRBP09619 1106 aa5.26□□□□□ -1.57
CHD9-212ENST00000564641 FPR3P25089 353 aa5.26□□□□□ -1.57
CHD9-212ENST00000564641 MTHFSP49914 203 aa5.26□□□□□ -1.57
CHD9-212ENST00000564641 ALDH5A1P51649 535 aaPredicted RBP5.26□□□□□ -1.57
CHD9-212ENST00000564641 RABEP1Q15276 862 aa5.26□□□□□ -1.57
CHD9-212ENST00000564641 AWAT2Q6E213 333 aa5.26□□□□□ -1.57
CHD9-212ENST00000564641 NGDNQ8NEJ9 315 aaKnown RBP5.26□□□□□ -1.57
CHD9-212ENST00000564641 ZNF398Q8TD17 642 aa5.26□□□□□ -1.57
CHD9-212ENST00000564641 SPSB4Q96A44 273 aa5.26□□□□□ -1.57
CHD9-212ENST00000564641 SPRTNQ9H040 489 aaPredicted RBP5.26□□□□□ -1.57
CHD9-212ENST00000564641 CDH19Q9H159 772 aa5.26□□□□□ -1.57
CHD9-212ENST00000564641 TRNAU1APQ9NX07 287 aaKnown RBP5.26□□□□□ -1.57
CHD9-212ENST00000564641 CDY1Q9Y6F8 540 aa5.26□□□□□ -1.57
CHD9-212ENST00000564641 KIF21AQ7Z4S6 1674 aa5.26□□□□□ -1.57
CHD9-212ENST00000564641 MROH2BQ7Z745 1585 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 LOC102723971A0A1B0GUV8 181 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 TMPRSS11DO60235 418 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 TUSC2O75896 110 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 TMEM191BP0C7N4 346 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 KITP10721 976 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 FOXG1P55316 489 aaPredicted RBP5.25□□□□□ -1.57
CHD9-212ENST00000564641 GHRHRQ02643 423 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 MAEAQ7L5Y9 396 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 C16orf52Q8NHV5 167 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 TMEM171Q8WVE6 324 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 COQ8BQ96D53 544 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 VN1R3Q9BXE9 311 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 KRTAP1-5Q9BYS1 174 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 SMURF2Q9HAU4 748 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 GAR1Q9NY12 217 aaKnown RBP5.25□□□□□ -1.57
CHD9-212ENST00000564641 ASIC5Q9NY37 505 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 DDX56Q9NY93 547 aaKnown RBP5.25□□□□□ -1.57
CHD9-212ENST00000564641 KLHL13Q9P2N7 655 aa5.25□□□□□ -1.57
CHD9-212ENST00000564641 WDR62O43379 1518 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 MBD3L4A6NDZ8 208 aaPredicted RBP5.24□□□□□ -1.57
CHD9-212ENST00000564641 MBD3L3A6NE82 208 aaPredicted RBP5.24□□□□□ -1.57
CHD9-212ENST00000564641 CAPN8A6NHC0 703 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 ISM1B1AKI9 464 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 FAM227AF5H4B4 570 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 TRIM38O00635 465 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 FCHO1O14526 889 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 INSIG1O15503 277 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 CTNND1O60716 968 aaKnown RBP5.24□□□□□ -1.57
CHD9-212ENST00000564641 VNN1O95497 513 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 SLC7A1P30825 629 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 RAB27AP51159 221 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 Q4G0T1 1027 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 DCAF12L1Q5VU92 463 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 ANO7Q6IWH7 933 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 TECPR1Q7Z6L1 1165 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 IL31RAQ8NI17 732 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 LRGUKQ96M69 825 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 NT5C1BQ96P26 610 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 WACQ9BTA9 647 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 EFHD1Q9BUP0 239 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 TMEM60Q9H2L4 133 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 RGS17Q9UGC6 210 aaPredicted RBP5.24□□□□□ -1.57
CHD9-212ENST00000564641 AFG3L2Q9Y4W6 797 aa5.24□□□□□ -1.57
CHD9-212ENST00000564641 FRS3O43559 492 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 RGS10O43665 173 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 KLRC1P26715 233 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 UQCRC1P31930 480 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 TIRAPP58753 221 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 IGBP1P78318 339 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 LMAN2Q12907 356 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 LARS2Q15031 903 aaKnown RBP5.23□□□□□ -1.57
CHD9-212ENST00000564641 PTCHD3Q3KNS1 767 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 C10orf25Q5T742 122 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 CXorf57Q6NSI4 855 aaKnown RBP5.23□□□□□ -1.57
CHD9-212ENST00000564641 TMEM65Q6PI78 240 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 SHC4Q6S5L8 630 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 VSTM1Q6UX27 236 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 NPNTQ6UXI9 565 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 ZNF517Q6ZMY9 492 aaPredicted RBP5.23□□□□□ -1.57
CHD9-212ENST00000564641 DPY19L3Q6ZPD9 716 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 EPM2AIP1Q7L775 607 aaPredicted RBP5.23□□□□□ -1.57
CHD9-212ENST00000564641 TPH2Q8IWU9 490 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 ZBTB34Q8NCN2 500 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.23□□□□□ -1.57
CHD9-212ENST00000564641 PPP1R35Q8TAP8 253 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 OSR1Q8TAX0 266 aaPredicted RBP5.23□□□□□ -1.57
CHD9-212ENST00000564641 DNAJB14Q8TBM8 379 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 SMCR8Q8TEV9 937 aaPredicted RBP5.23□□□□□ -1.57
CHD9-212ENST00000564641 ZNF668Q96K58 619 aaPredicted RBP5.23□□□□□ -1.57
CHD9-212ENST00000564641 ZC3H10Q96K80 434 aaKnown RBP5.23□□□□□ -1.57
CHD9-212ENST00000564641 RTFDC1Q9BY42 306 aaPredicted RBP5.23□□□□□ -1.57
CHD9-212ENST00000564641 ZCWPW1Q9H0M4 648 aa5.23□□□□□ -1.57
CHD9-212ENST00000564641 DHX36Q9H2U1 1008 aaKnown RBP5.23□□□□□ -1.57
CHD9-212ENST00000564641 FANCD2Q9BXW9 1451 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 H3BNC9 293 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 SRGAP2O75044 1071 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 RASAL1O95294 804 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 NTN1O95631 604 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 CD19P15391 556 aa5.22□□□□□ -1.57
CHD9-212ENST00000564641 COPB1P53618 953 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms