RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 DMAP1Q9NPF5 467 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-210ENST00000564587 ADAM28Q9UKQ2 775 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 STAP1Q9ULZ2 295 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 ATP11BQ9Y2G3 1177 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 NR2E1Q9Y466 385 aa16.29■□□□□ 0.2
COMMD4-210ENST00000564587 hCG_1818297A0A087WSY0 165 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 ABHD14A-ACY1A0A1B0GW23 586 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-210ENST00000564587 OR6C75A6NL08 312 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 ZNF487B1APH4 448 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 I3L4J1 428 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 PIK3R2O00459 728 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 GAS8O95995 478 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 KDELR1P24390 212 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 CYP2C18P33260 490 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 NOS2P35228 1153 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 MATKP42679 507 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 CDKN2BP42772 138 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 TKTL1P51854 596 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 YWHAZP63104 245 aaKnown RBP16.28■□□□□ 0.2
COMMD4-210ENST00000564587 SMARCB1Q12824 385 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 TAZQ16635 292 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 DAB2IPQ5VWQ8 1189 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 DRICH1Q6PGQ1 229 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-210ENST00000564587 MFSD7Q6UXD7 560 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 NECAB2Q7Z6G3 386 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 SPATA2LQ8IUW3 424 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-210ENST00000564587 KCTD6Q8NC69 237 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 ATL2Q8NHH9 583 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 HASPINQ8TF76 798 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 AENQ8WTP8 325 aaKnown RBP16.28■□□□□ 0.2
COMMD4-210ENST00000564587 FUBP3Q96I24 572 aaKnown RBP eCLIP16.28■□□□□ 0.2
COMMD4-210ENST00000564587 SMOQ99835 787 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 ERP44Q9BS26 406 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 TMEM106CQ9BVX2 250 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 DCLK3Q9C098 648 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 ZWILCHQ9H900 591 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 VIPAS39Q9H9C1 493 aa16.28■□□□□ 0.2
COMMD4-210ENST00000564587 SF3B1O75533 1304 aaKnown RBP eCLIP16.27■□□□□ 0.2
COMMD4-210ENST00000564587 H7C4K7 107 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 NRP1O14786 923 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 MDM4O15151 490 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 TTI1O43156 1089 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 GRAP2O75791 330 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 ZMYND10O75800 440 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 ECEL1O95672 775 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 ITGB1P05556 798 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 PTGIRP43119 386 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 ADCY1Q08828 1119 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 SLC25A52Q3SY17 297 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 ZNF280DQ6N043 979 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 JAMLQ86YT9 394 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 PSTKQ8IV42 348 aaKnown RBP16.27■□□□□ 0.2
COMMD4-210ENST00000564587 FAM172AQ8WUF8 416 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 CAVIN3Q969G5 261 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 ZCWPW1Q9H0M4 648 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 PRDM16Q9HAZ2 1276 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 NGRNQ9NPE2 291 aaKnown RBP16.27■□□□□ 0.2
COMMD4-210ENST00000564587 ZNF446Q9NWS9 450 aa16.27■□□□□ 0.2
COMMD4-210ENST00000564587 PRG3Q9Y2Y8 225 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-210ENST00000564587 SCN5AQ14524 2016 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 MICAL3Q7RTP6 2002 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 TCRBV7S2A1N4TA0A589 114 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 TBKBP1A7MCY6 615 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 NDC80O14777 642 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 BEST1O76090 585 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 ENDOD1O94919 500 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 TCF4P15884 667 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 IL1R2P27930 398 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 DAOAP59103 153 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 GPS2Q13227 327 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 TFDP2Q14188 446 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 ATP13A4Q4VNC1 1196 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 TRNP1Q6NT89 227 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 VSTM1Q6UX27 236 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 BEND5Q7L4P6 421 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 DEFB128Q7Z7B8 93 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 ZDHHC14Q8IZN3 488 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 TET1Q8NFU7 2136 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 CCHCR1Q8TD31 782 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 CASKIN2Q8WXE0 1202 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 IFT81Q8WYA0 676 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 RAPGEF5Q92565 580 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 FAM149B1Q96BN6 582 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 PIWIL1Q96J94 861 aaKnown RBP16.26■□□□□ 0.19
COMMD4-210ENST00000564587 CFAP57Q96MR6 1250 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 SLC2A13Q96QE2 648 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 C11orf84Q9BUA3 381 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-210ENST00000564587 HEMGNQ9BXL5 484 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 MAK16Q9BXY0 300 aaKnown RBP16.26■□□□□ 0.19
COMMD4-210ENST00000564587 FUT8Q9BYC5 575 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 POPDC2Q9HBU9 364 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 DNAJB4Q9UDY4 337 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 PCSK1NQ9UHG2 260 aa16.26■□□□□ 0.19
COMMD4-210ENST00000564587 DRG1Q9Y295 367 aaKnown RBP16.26■□□□□ 0.19
COMMD4-210ENST00000564587 C3orf70A6NLC5 250 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-210ENST00000564587 PI4K2BG5E9Z4 385 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 MAP2K7O14733 419 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 KIAA0355O15063 1070 aa16.25■□□□□ 0.19
COMMD4-210ENST00000564587 B4GALT3O60512 393 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms