RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 HESX1Q9UBX0 185 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 CHORDC1Q9UHD1 332 aaPredicted RBP18.26■□□□□ 0.51
USB1-209ENST00000564387 DNAJC12Q9UKB3 198 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 ARHGAP26Q9UNA1 814 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 CCL26Q9Y258 94 aa18.26■□□□□ 0.51
USB1-209ENST00000564387 KRBA1A5PL33 1030 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 FAM86C2PA6NEL3 165 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 LGALS16A8MUM7 142 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 TULP2O00295 520 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 CHADO15335 359 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 CFHP08603 1231 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 ATP1A3P13637 1013 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 UCHL3P15374 230 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 RPL34P49207 117 aaKnown RBP18.25■□□□□ 0.51
USB1-209ENST00000564387 MLLT6P55198 1093 aaPredicted RBP18.25■□□□□ 0.51
USB1-209ENST00000564387 SLC8A3P57103 927 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 ZXDBP98169 803 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 PM20D1Q6GTS8 502 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 FAM71AQ8IYT1 594 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 SCML4Q8N228 414 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 ANKRD20A12PQ8NF67 263 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 RIN3Q8TB24 985 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 BPIFB1Q8TDL5 484 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 ZNF606Q8WXB4 792 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 IRF7Q92985 503 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 ERGIC2Q96RQ1 377 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 SMG9Q9H0W8 520 aaKnown RBP18.25■□□□□ 0.51
USB1-209ENST00000564387 GMIPQ9P107 970 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 SIK3Q9Y2K2 1263 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 DAAM1Q9Y4D1 1078 aa18.25■□□□□ 0.51
USB1-209ENST00000564387 FOXN3O00409 490 aaPredicted RBP18.24■□□□□ 0.51
USB1-209ENST00000564387 TPM2P07951 284 aa18.24■□□□□ 0.51
USB1-209ENST00000564387 KRT5P13647 590 aa18.24■□□□□ 0.51
USB1-209ENST00000564387 CDK11BP21127 795 aaKnown RBP18.24■□□□□ 0.51
USB1-209ENST00000564387 BRD2P25440 801 aaKnown RBP18.24■□□□□ 0.51
USB1-209ENST00000564387 STARD6P59095 220 aa18.24■□□□□ 0.51
USB1-209ENST00000564387 IFRD2Q12894 506 aaPredicted RBP18.24■□□□□ 0.51
USB1-209ENST00000564387 USP4Q13107 963 aa18.24■□□□□ 0.51
USB1-209ENST00000564387 GRM2Q14416 872 aa18.24■□□□□ 0.51
USB1-209ENST00000564387 NFKBIBQ15653 356 aa18.24■□□□□ 0.51
USB1-209ENST00000564387 ZNF77Q15935 545 aa18.24■□□□□ 0.51
USB1-209ENST00000564387 ARHGAP44Q17R89 818 aa18.24■□□□□ 0.51
USB1-209ENST00000564387 ARHGAP29Q52LW3 1261 aa18.24■□□□□ 0.51
USB1-209ENST00000564387 IER5LQ5T953 404 aa18.24■□□□□ 0.51
USB1-209ENST00000564387 GPIHBP1Q8IV16 184 aa18.24■□□□□ 0.51
USB1-209ENST00000564387 FAM83CQ9BQN1 747 aa18.24■□□□□ 0.51
USB1-209ENST00000564387 DDX23Q9BUQ8 820 aaKnown RBP18.24■□□□□ 0.51
USB1-209ENST00000564387 GANQ9H2C0 597 aa18.24■□□□□ 0.51
USB1-209ENST00000564387 CYLDQ9NQC7 956 aa18.24■□□□□ 0.51
USB1-209ENST00000564387 TLR8Q9NR97 1041 aaKnown RBP18.24■□□□□ 0.51
USB1-209ENST00000564387 HELZP42694 1942 aaKnown RBP18.23■□□□□ 0.51
USB1-209ENST00000564387 SHISA7A6NL88 538 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 PES1O00541 588 aaKnown RBP18.23■□□□□ 0.51
USB1-209ENST00000564387 DPYSL4O14531 572 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 ZNF263O14978 683 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 COCHO43405 550 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 GABBR2O75899 941 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 CALCAP01258 141 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 CKMP06732 381 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 GDI1P31150 447 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 CLCN1P35523 988 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 GPD2P43304 727 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 PSEN1P49768 467 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 PLCB2Q00722 1185 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 PRKCQQ04759 706 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 SLC44A4Q53GD3 710 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 FKBP15Q5T1M5 1219 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 HECTD3Q5T447 861 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 KLHDC10Q6PID8 442 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 BHLHA9Q7RTU4 235 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 SCD5Q86SK9 330 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 FBXL6Q8N531 539 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 UBA3Q8TBC4 463 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 PBXIP1Q96AQ6 731 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 ZFRQ96KR1 1074 aaKnown RBP18.23■□□□□ 0.51
USB1-209ENST00000564387 BRD9Q9H8M2 597 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 NMUR1Q9HB89 426 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 TRPC7Q9HCX4 862 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 ARHGEF3Q9NR81 526 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 OSER1Q9NX31 292 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 CLIC5Q9NZA1 410 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 FHOD1Q9Y613 1164 aa18.23■□□□□ 0.51
USB1-209ENST00000564387 CYP26A1O43174 497 aa18.22■□□□□ 0.51
USB1-209ENST00000564387 MED7O43513 233 aa18.22■□□□□ 0.51
USB1-209ENST00000564387 PDGFBP01127 241 aaPredicted RBP18.22■□□□□ 0.51
USB1-209ENST00000564387 GLULP15104 373 aa18.22■□□□□ 0.51
USB1-209ENST00000564387 TKTL1P51854 596 aa18.22■□□□□ 0.51
USB1-209ENST00000564387 DRAP1Q14919 205 aaPredicted RBP18.22■□□□□ 0.51
USB1-209ENST00000564387 PMF1Q6P1K2 205 aa18.22■□□□□ 0.51
USB1-209ENST00000564387 SIX5Q8N196 739 aa18.22■□□□□ 0.51
USB1-209ENST00000564387 STK32AQ8WU08 396 aa18.22■□□□□ 0.51
USB1-209ENST00000564387 HSFY1Q96LI6 401 aa18.22■□□□□ 0.51
USB1-209ENST00000564387 LSM14BQ9BX40 385 aaKnown RBP18.22■□□□□ 0.51
USB1-209ENST00000564387 STK33Q9BYT3 514 aa18.22■□□□□ 0.51
USB1-209ENST00000564387 CCSER2Q9H7U1 834 aa18.22■□□□□ 0.51
USB1-209ENST00000564387 CBX8Q9HC52 389 aa18.22■□□□□ 0.51
USB1-209ENST00000564387 ACP6Q9NPH0 428 aa18.22■□□□□ 0.51
USB1-209ENST00000564387 FBXL21Q9UKT6 434 aa18.22■□□□□ 0.51
USB1-209ENST00000564387 PCDHGC3Q9UN70 934 aa18.22■□□□□ 0.51
USB1-209ENST00000564387 MYO16Q9Y6X6 1858 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms