RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 P4HA2O15460 535 aa13.24□□□□□ -0.29
CCDC187-201ENST00000563590 ZSCAN9O15535 394 aaPredicted RBP13.24□□□□□ -0.29
CCDC187-201ENST00000563590 GRIN3BO60391 1043 aa13.24□□□□□ -0.29
CCDC187-201ENST00000563590 ASLP04424 464 aa13.24□□□□□ -0.29
CCDC187-201ENST00000563590 WEE2P0C1S8 567 aa13.24□□□□□ -0.29
CCDC187-201ENST00000563590 KLRC2P26717 231 aa13.24□□□□□ -0.29
CCDC187-201ENST00000563590 SLC1A1P43005 524 aa13.24□□□□□ -0.29
CCDC187-201ENST00000563590 ATP5OP48047 213 aa13.24□□□□□ -0.29
CCDC187-201ENST00000563590 FOLH1Q04609 750 aa13.24□□□□□ -0.29
CCDC187-201ENST00000563590 CLEC16AQ2KHT3 1053 aa13.24□□□□□ -0.29
CCDC187-201ENST00000563590 BRDTQ58F21 947 aaPredicted RBP13.24□□□□□ -0.29
CCDC187-201ENST00000563590 ATG16L1Q676U5 607 aa13.24□□□□□ -0.29
CCDC187-201ENST00000563590 KRT39Q6A163 491 aa13.24□□□□□ -0.29
CCDC187-201ENST00000563590 DDX1Q92499 740 aaKnown RBP13.24□□□□□ -0.29
CCDC187-201ENST00000563590 COX16Q9P0S2 106 aa13.24□□□□□ -0.29
CCDC187-201ENST00000563590 PHF24Q9UPV7 400 aa13.24□□□□□ -0.29
CCDC187-201ENST00000563590 ATRNL1Q5VV63 1379 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 ZNF862O60290 1169 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 CYP3A4P08684 503 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 IMPDH2P12268 514 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 ADSSP30520 456 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 CHN2P52757 468 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 PRAMEP78395 509 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 TFAMQ00059 246 aaKnown RBP13.23□□□□□ -0.29
CCDC187-201ENST00000563590 LSAMPQ13449 338 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 PPP2R5DQ14738 602 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 KBTBD12Q3ZCT8 623 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 RELL1Q8IUW5 271 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 WDR75Q8IWA0 830 aaKnown RBP13.23□□□□□ -0.29
CCDC187-201ENST00000563590 HSPH1Q92598 858 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 MCEEQ96PE7 176 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 STRA6Q9BX79 667 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 CAAP1Q9H8G2 361 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 NCKAP1LP55160 1127 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 RPS6P62753 249 aaKnown RBP13.23□□□□□ -0.29
CCDC187-201ENST00000563590 KRT81Q14533 505 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 OASLQ15646 514 aaKnown RBP13.23□□□□□ -0.29
CCDC187-201ENST00000563590 SNRNP35Q16560 246 aaKnown RBP13.23□□□□□ -0.29
CCDC187-201ENST00000563590 HPS6Q86YV9 775 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 NDUFAF2Q8N183 169 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 HELQQ8TDG4 1101 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.23□□□□□ -0.29
CCDC187-201ENST00000563590 EBF4Q9BQW3 602 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 INPP5FQ9Y2H2 1132 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 ASTN2O75129 1339 aaPredicted RBP13.23□□□□□ -0.29
CCDC187-201ENST00000563590 MYH11P35749 1972 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 SPDYE2BA6NHP3 402 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 E5RJQ4 531 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 NEMP1O14524 444 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 NDC80O14777 642 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 AVILO75366 819 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 SPDYE6P0CI01 402 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 SRGAP2BP0DMP2 458 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 TCF4P15884 667 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 DMP1Q13316 513 aaPredicted RBP13.23□□□□□ -0.29
CCDC187-201ENST00000563590 ANKRD22Q5VYY1 191 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 KRT80Q6KB66 452 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 MCOLN2Q8IZK6 566 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 FBXL13Q8NEE6 735 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 PTCD3Q96EY7 689 aaKnown RBP13.23□□□□□ -0.29
CCDC187-201ENST00000563590 ATXN7L3BQ96GX2 97 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 SRPK1Q96SB4 655 aaKnown RBP13.23□□□□□ -0.29
CCDC187-201ENST00000563590 MMP19Q99542 508 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 MYOZ2Q9NPC6 264 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 IL1RAPL1Q9NZN1 696 aa13.23□□□□□ -0.29
CCDC187-201ENST00000563590 HEMK1Q9Y5R4 338 aaPredicted RBP13.23□□□□□ -0.29
CCDC187-201ENST00000563590 MRPL42Q9Y6G3 142 aaKnown RBP13.23□□□□□ -0.29
CCDC187-201ENST00000563590 SEC24DO94855 1032 aaPredicted RBP13.22□□□□□ -0.29
CCDC187-201ENST00000563590 UQCRBP14927 111 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 RGS2P41220 211 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 ELK3P41970 407 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 EML3Q32P44 896 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 DNAJC24Q6P3W2 148 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 DARS2Q6PI48 645 aaKnown RBP13.22□□□□□ -0.29
CCDC187-201ENST00000563590 TDRPQ86YL5 185 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 SPON1Q9HCB6 807 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 MRPL47Q9HD33 250 aaKnown RBP13.22□□□□□ -0.29
CCDC187-201ENST00000563590 IVNS1ABPQ9Y6Y0 642 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 ARHGAP10A1A4S6 786 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 WDR64B1ANS9 1081 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 CST8O60676 142 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 LYPLA1O75608 230 aaPredicted RBP13.22□□□□□ -0.29
CCDC187-201ENST00000563590 PSMD7P51665 324 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 STX3Q13277 289 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 MPP3Q13368 585 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 SNRNP48Q6IEG0 339 aaKnown RBP13.22□□□□□ -0.29
CCDC187-201ENST00000563590 C16orf46Q6P387 395 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 NET1Q7Z628 596 aaPredicted RBP13.22□□□□□ -0.29
CCDC187-201ENST00000563590 PPP4R1Q8TF05 950 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 DGCR14Q96DF8 476 aaKnown RBP13.22□□□□□ -0.29
CCDC187-201ENST00000563590 ATG4CQ96DT6 458 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 CCT7Q99832 543 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 ZNF180Q9UJW8 692 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 SOX13Q9UN79 622 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 TAF1LQ8IZX4 1826 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 TM7SF2O76062 418 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 SAT1P21673 171 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 YWHABP31946 246 aaKnown RBP13.22□□□□□ -0.29
CCDC187-201ENST00000563590 COPAP53621 1224 aa13.22□□□□□ -0.29
CCDC187-201ENST00000563590 MAPK10P53779 464 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms