RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 SLC1A1P43005 524 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 SLC5A3P53794 718 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 ERVFC1P60507 584 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 DUSP4Q13115 394 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 RAB33AQ14088 237 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 PIGHQ14442 188 aaPredicted RBP10.67□□□□□ -0.7
SMG1-208ENST00000563448 RPS6KA1Q15418 735 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 EFHC1Q5JVL4 640 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 PM20D1Q6GTS8 502 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 HFE2Q6ZVN8 426 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 BHLHA9Q7RTU4 235 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 SCML4Q8N228 414 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 NIPA2Q8N8Q9 360 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 STKLD1Q8NE28 680 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 SCAMP5Q8TAC9 235 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 ZNF461Q8TAF7 563 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 SPPL3Q8TCT6 385 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 RXFP2Q8WXD0 754 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 OSBPL9Q96SU4 736 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 RXFP1Q9HBX9 757 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 CNGB3Q9NQW8 809 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 LCMT1Q9UIC8 334 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 SNX12Q9UMY4 172 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 LZTS1Q9Y250 596 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 PCDHA11Q9Y5I1 949 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 SAR1BQ9Y6B6 198 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 USP3Q9Y6I4 520 aa10.67□□□□□ -0.7
SMG1-208ENST00000563448 DOCK6Q96HP0 2047 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 YJEFN3A6XGL0 299 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 E7ENQ6 273 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 SPOPO43791 374 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 CXCL14O95715 111 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 ZBED1O96006 694 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 PRLRP16471 622 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 PSMA2P25787 234 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 MAN1A1P33908 653 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 PBX2P40425 430 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 DNA2P51530 1060 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 ZNF143P52747 638 aaPredicted RBP10.66□□□□□ -0.7
SMG1-208ENST00000563448 TAS2R40P59535 323 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 MGAT5BQ3V5L5 792 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 CCDC14Q49A88 953 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 ARCQ7LC44 396 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 ARFGAP1Q8N6T3 406 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 POF1BQ8WVV4 589 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 KRT35Q92764 455 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 PSMB7Q99436 277 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 SEPT5Q99719 369 aaPredicted RBP10.66□□□□□ -0.7
SMG1-208ENST00000563448 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMG1-208ENST00000563448 ASNSD1Q9NWL6 643 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 AFF4Q9UHB7 1163 aaKnown RBP10.66□□□□□ -0.7
SMG1-208ENST00000563448 MTUS1Q9ULD2 1270 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 USTQ9Y2C2 406 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 SSX2IPQ9Y2D8 614 aa10.66□□□□□ -0.7
SMG1-208ENST00000563448 DPYSL4O14531 572 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 ZNF185O15231 689 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 TEX28O15482 410 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 DAB1O75553 588 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 CNPP09543 421 aaKnown RBP10.65□□□□□ -0.7
SMG1-208ENST00000563448 ATF2P15336 505 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 TCF4P15884 667 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 PDGFRAP16234 1089 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 CTNNA2P26232 953 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 CXCR5P32302 372 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 CA8P35219 290 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 CTNNA1P35221 906 aaKnown RBP10.65□□□□□ -0.7
SMG1-208ENST00000563448 MARCKSL1P49006 195 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 PEX5P50542 639 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 IFRD2Q12894 506 aaPredicted RBP10.65□□□□□ -0.7
SMG1-208ENST00000563448 C15orf59Q2T9L4 293 aaPredicted RBP10.65□□□□□ -0.7
SMG1-208ENST00000563448 RAB6CQ53S08 254 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 TPGS2Q68CL5 300 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 CC2D1AQ6P1N0 951 aaPredicted RBP10.65□□□□□ -0.7
SMG1-208ENST00000563448 TMC7Q7Z402 723 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 DEFB106AQ8N104 65 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 NUP93Q8N1F7 819 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.65□□□□□ -0.7
SMG1-208ENST00000563448 GPR152Q8TDT2 470 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 IRGQQ8WZA9 623 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 CFAP57Q96MR6 1250 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 RAB6CQ9H0N0 254 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 CDC23Q9UJX2 597 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 MRFAP1Q9Y605 127 aa10.65□□□□□ -0.7
SMG1-208ENST00000563448 MIF4GDA9UHW6 222 aaKnown RBP10.65□□□□□ -0.71
SMG1-208ENST00000563448 HSF2BPO75031 334 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 FYNP06241 537 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 RB1P06400 928 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 GLI1P08151 1106 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 ATF6P18850 670 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 USP46P62068 366 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 YWHAZP63104 245 aaKnown RBP10.65□□□□□ -0.71
SMG1-208ENST00000563448 CREMQ03060 361 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 SH3PXD2AQ5TCZ1 1133 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 DCAF12L1Q5VU92 463 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 COG1Q8WTW3 980 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 ALG3Q92685 438 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 FAM149B1Q96BN6 582 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 SPATA17Q96L03 361 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 KLHL5Q96PQ7 755 aa10.65□□□□□ -0.71
SMG1-208ENST00000563448 SLC2A13Q96QE2 648 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms