RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 FBXO43Q4G163 708 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 HECTD3Q5T447 861 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 TCERG1LQ5VWI1 586 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 CLEC20AQ6ZU45 233 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 ZNF276Q8N554 614 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 SCAMP5Q8TAC9 235 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 UBXN6Q9BZV1 441 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 RNF38Q9H0F5 515 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 MMRN2Q9H8L6 949 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 CISHQ9NSE2 258 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 FAM49BQ9NUQ9 324 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 SCML2Q9UQR0 700 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 R4GN57 208 aa12.93□□□□□ -0.34
NSMCE1-204ENST00000563273 PTPRDP23468 1912 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 E2F8A0AVK6 867 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 COCHO43405 550 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 BEST1O76090 585 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 GNA14O95837 355 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 TBXAS1P24557 533 aaPredicted RBP12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 GJA4P35212 333 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 MARSP56192 900 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 YWHAEP62258 255 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 ORC1Q13415 861 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 DCAF17Q5H9S7 520 aaPredicted RBP12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 ARHGAP17Q68EM7 881 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 KLHDC10Q6PID8 442 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 CCDC26Q8TAB7 109 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 TTC8Q8TAM2 541 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 ATRIPQ8WXE1 791 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 OTUB2Q96DC9 234 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 TMEM176AQ96HP8 235 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 ZFRQ96KR1 1074 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 DUSP16Q9BY84 665 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 CYLDQ9NQC7 956 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 TLR8Q9NR97 1041 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 TBC1D14Q9P2M4 693 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 CPQQ9Y646 472 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 WNT6Q9Y6F9 365 aa12.92□□□□□ -0.34
NSMCE1-204ENST00000563273 CHURC1-FNTBB4DL54 471 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 ATG13O75143 517 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 CD58P19256 250 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 ADORA2BP29275 332 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 EIF2DP41214 584 aaKnown RBP12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 FMO5P49326 533 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 PSEN1P49768 467 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 KIF11P52732 1056 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 RAD23BP54727 409 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 CETN1Q12798 172 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 IFRD2Q12894 506 aaPredicted RBP12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 PAK1Q13153 545 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 CUL2Q13617 745 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 PPP1R26Q5T8A7 1209 aaPredicted RBP12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 FSTL4Q6MZW2 842 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 ADGRG2Q8IZP9 1017 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 SUMF1Q8NBK3 374 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 SLC4A11Q8NBS3 891 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 NELFBQ8WX92 580 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 CD101Q93033 1021 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 P2RY13Q9BPV8 354 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 EPC1Q9H2F5 836 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.91□□□□□ -0.345e-8■■■■■ 402.4
NSMCE1-204ENST00000563273 RBM12Q9NTZ6 932 aaKnown RBP12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 GMIPQ9P107 970 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 KIAA1468Q9P260 1216 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 CHORDC1Q9UHD1 332 aaPredicted RBP12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 KIAA1257Q9ULG3 409 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 USP3Q9Y6I4 520 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 MIA3Q5JRA6 1907 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 TICRRQ7Z2Z1 1910 aa12.91□□□□□ -0.34
NSMCE1-204ENST00000563273 CCDC163A0A0D9SF12 145 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 K7ESF4 209 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 TLR5O60602 858 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 FGFR1OPO95684 399 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 ABL1P00519 1130 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 MBL2P11226 248 aaPredicted RBP12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 CNR2P34972 360 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 GALK1P51570 392 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 SATB1Q01826 763 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 SMYD5Q6GMV2 418 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 ISM2Q6H9L7 571 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 CLEC17AQ6ZS10 378 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 Q6ZS52 159 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 CCDC186Q7Z3E2 898 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 UBR7Q8N806 425 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 TATDN2Q93075 761 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 HEXIM2Q96MH2 286 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 ARID3AQ99856 593 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 LINC00597Q9H2U6 94 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 CFAP97Q9P2B7 532 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 PATJQ8NI35 1801 aa12.9□□□□□ -0.34
NSMCE1-204ENST00000563273 DENND4CQ5VZ89 1909 aa12.9□□□□□ -0.35
NSMCE1-204ENST00000563273 CACNA1IQ9P0X4 2223 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 OBSL1O75147 1896 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 ADH1CP00326 375 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 ACO1P21399 889 aaKnown RBP12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 SLC8A3P57103 927 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 CCDC40Q4G0X9 1142 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 RAB41Q5JT25 222 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 KLHL10Q6JEL2 608 aa12.89□□□□□ -0.35
NSMCE1-204ENST00000563273 TSSK4Q6SA08 328 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms