RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ADGRA2Q96PE1 1338 aa3.88□□□□□ -1.79
SHCBP1-202ENST00000563219 A0A087WZ62 844 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 AQP7P3A6NL99 342 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 RAB27BO00194 218 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 KCNQ3O43525 872 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 PEX1O43933 1283 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 TLR5O60602 858 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 IGLV2-14P01704 120 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 MYL4P12829 197 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 COPAP53621 1224 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 ATXN1P54253 815 aaKnown RBP3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 RAPGEF1Q13905 1077 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 SLC35G1Q2M3R5 365 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 ARL13BQ3SXY8 428 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 USP17L6PQ6QN14 398 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 KCTD20Q7Z5Y7 419 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 PAF1Q8N7H5 531 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 CYP2W1Q8TAV3 490 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 SMCR8Q8TEV9 937 aaPredicted RBP3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 PPM1EQ8WY54 764 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 ATG4AQ8WYN0 398 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 PDLIM2Q96JY6 352 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 ZNF668Q96K58 619 aaPredicted RBP3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 SELENOOQ9BVL4 669 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 ARFGAP3Q9NP61 516 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 SEMA4GQ9NTN9 838 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 TRMT13Q9NUP7 481 aaKnown RBP3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 FOXJ2Q9P0K8 574 aa3.87□□□□□ -1.79
SHCBP1-202ENST00000563219 VWC2LB2RUY7 222 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 PPM1DO15297 605 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 SLC16A3O15427 465 aaKnown RBP3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 CD3EAPO15446 510 aaKnown RBP3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 PIAS2O75928 621 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 C1RP00736 705 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 RHOP08100 348 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 HARSP12081 509 aaKnown RBP3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 TPH1P17752 444 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 PPM1AP35813 382 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 IL6STP40189 918 aaPredicted RBP3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 CACNA2D1P54289 1103 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 PRKAG1P54619 331 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 BCAT1P54687 386 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 SP2Q02086 613 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 NHLH1Q02575 133 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 CCNIQ14094 377 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 RALBP1Q15311 655 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 TXNRD1Q16881 649 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 PTCHD3Q3KNS1 767 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 CERCAMQ5T4B2 595 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 ZNF618Q5T7W0 954 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 CACHD1Q5VU97 1274 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 SPARTQ8N0X7 666 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 ABRAQ8N0Z2 381 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 CPXCR1Q8N123 301 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 MYCT1Q8N699 235 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 TOR1AIP2Q8NFQ8 470 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 DNAJB14Q8TBM8 379 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 CCT6BQ92526 530 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 RFKQ969G6 155 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 FKBP10Q96AY3 582 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 FBXL20Q96IG2 436 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 PBKQ96KB5 322 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 GBA2Q9HCG7 927 aaPredicted RBP3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 HEYLQ9NQ87 328 aaPredicted RBP3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 TBC1D23Q9NUY8 699 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 EHD3Q9NZN3 535 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 MAGED2Q9UNF1 606 aaPredicted RBP3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 SH2B3Q9UQQ2 575 aa3.86□□□□□ -1.79
SHCBP1-202ENST00000563219 hCG_1642624A0A1W2PR95 340 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 CCDC151A5D8V7 595 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 ADM5C9JUS6 153 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 INO80B-WBP1J3KQ70 363 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 HNRNPDLO14979 420 aaKnown RBP3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 PLA2G6O60733 806 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 SRGAP2O75044 1071 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 C1QL1O75973 258 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 NXPH3O95157 252 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 RASAL1O95294 804 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 ONECUT2O95948 504 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 PDHA1P08559 390 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 CDK4P11802 303 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 EEF1GP26641 437 aaKnown RBP3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 GABRB3P28472 473 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 HSPA7P48741 367 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 MRPS35P82673 323 aaKnown RBP3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 TIAL1Q01085 375 aaKnown RBP eCLIP3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 TNFAIP2Q03169 654 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 TBCCQ15814 346 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 MPEG1Q2M385 716 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 RRAGBQ5VZM2 374 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 MZT2AQ6P582 158 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 KIAA0408Q6ZU52 694 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 MAVSQ7Z434 540 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 KRT73Q86Y46 540 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 IZUMO1Q8IYV9 350 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 OSCP1Q8WVF1 389 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 ATRIPQ8WXE1 791 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 SOCS4Q8WXH5 440 aa3.85□□□□□ -1.79
SHCBP1-202ENST00000563219 ZDHHC12Q96GR4 267 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms