RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 DCTN4Q9UJW0 460 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 CORO1CQ9ULV4 474 aaPredicted RBP13.64□□□□□ -0.23
USB1-207ENST00000563149 BCLAF3A2AJT9 711 aaKnown RBP13.63□□□□□ -0.23
USB1-207ENST00000563149 ZNF487B1APH4 448 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 GOLGA8RI6L899 631 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 GSC2O15499 205 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 SMNDC1O75940 238 aaKnown RBP eCLIP13.63□□□□□ -0.232e-6■■■■□ 22.6
USB1-207ENST00000563149 KRT37O76014 449 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 DLDP09622 509 aaKnown RBP13.63□□□□□ -0.23
USB1-207ENST00000563149 NEFHP12036 1026 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 GM2AP17900 193 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 ATP6V1C1P21283 382 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 PSMC4P43686 418 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 RAP1GAPP47736 663 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 YWHAGP61981 247 aaKnown RBP eCLIP13.63□□□□□ -0.23
USB1-207ENST00000563149 STILQ15468 1287 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 KYAT1Q16773 422 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 TSNAXIP1Q2TAA8 658 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 BOLA3Q53S33 107 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 DALRD3Q5D0E6 543 aaKnown RBP13.63□□□□□ -0.23
USB1-207ENST00000563149 FAM102AQ5T9C2 384 aaPredicted RBP13.63□□□□□ -0.23
USB1-207ENST00000563149 ANGEL2Q5VTE6 544 aaKnown RBP13.63□□□□□ -0.23
USB1-207ENST00000563149 PAXIP1Q6ZW49 1069 aaPredicted RBP13.63□□□□□ -0.23
USB1-207ENST00000563149 LRRC6Q86X45 466 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 IGDCC3Q8IVU1 814 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 APLFQ8IW19 511 aaPredicted RBP13.63□□□□□ -0.23
USB1-207ENST00000563149 LMNTD2Q8IXW0 634 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 ARHGAP24Q8N264 748 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 C1orf127Q8N9H9 656 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 RAB3IL1Q8TBN0 382 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.63□□□□□ -0.23
USB1-207ENST00000563149 TEKT4Q8WW24 435 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 PTPRN2Q92932 1015 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 KLF6Q99612 283 aaPredicted RBP13.63□□□□□ -0.23
USB1-207ENST00000563149 GPR20Q99678 358 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 TMEM120AQ9BXJ8 343 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 CADM1Q9BY67 442 aaKnown RBP13.63□□□□□ -0.23
USB1-207ENST00000563149 ELOVL4Q9GZR5 314 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 IQCGQ9H095 443 aaKnown RBP13.63□□□□□ -0.23
USB1-207ENST00000563149 ASB7Q9H672 318 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 PRMT7Q9NVM4 692 aaPredicted RBP13.63□□□□□ -0.23
USB1-207ENST00000563149 A0A0G2JMZ2 1700 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 A0A0G2JND7 137 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 C2CD4BA6NLJ0 364 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 ZBTB42B2RXF5 422 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 H7C0C1 242 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 M0QYV0 167 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 DPYSL4O14531 572 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 COPEO14579 308 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 PRPSAP2O60256 369 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 TOMM70O94826 608 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 STAU1O95793 577 aaKnown RBP13.63□□□□□ -0.23
USB1-207ENST00000563149 PYGBP11216 843 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 ACADSP16219 412 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 PRKCHP24723 683 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 CCNFP41002 786 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 ATP5OP48047 213 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 SERPINB4P48594 390 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 CDH8P55286 799 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 ZBTB16Q05516 673 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 EN1Q05925 392 aaPredicted RBP13.63□□□□□ -0.23
USB1-207ENST00000563149 OVGP1Q12889 678 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 FAM187BQ17R55 369 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 TMEM132AQ24JP5 1023 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 ATG16L1Q676U5 607 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 CCDC62Q6P9F0 684 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 LRRC71Q8N4P6 559 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 MCUQ8NE86 351 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 MTBPQ96DY7 904 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 C7orf26Q96N11 449 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 FAM111AQ96PZ2 611 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 USP29Q9HBJ7 922 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 ARL8BQ9NVJ2 186 aa13.63□□□□□ -0.23
USB1-207ENST00000563149 WDR90Q96KV7 1748 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 INO80B-WBP1J3KQ70 363 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 GYG2O15488 501 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 HBP1O60381 514 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 C1QAP02745 245 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 MCF2P10911 925 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 DESP17661 470 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 TAF5Q15542 800 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 EEF1DP3Q658K8 133 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 CYP4V2Q6ZWL3 525 aaPredicted RBP13.62□□□□□ -0.23
USB1-207ENST00000563149 KCNV2Q8TDN2 545 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 AFG1LQ8WV93 481 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 RXFP2Q8WXD0 754 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 TTC17Q96AE7 1141 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 PEBP4Q96S96 227 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 TBCBQ99426 244 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 MIPEPQ99797 713 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 INO80BQ9C086 356 aaPredicted RBP13.62□□□□□ -0.23
USB1-207ENST00000563149 KLC2Q9H0B6 622 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.62□□□□□ -0.23
USB1-207ENST00000563149 KCNK4Q9NYG8 393 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 BARX2Q9UMQ3 279 aaPredicted RBP13.62□□□□□ -0.23
USB1-207ENST00000563149 TTLL3Q9Y4R7 772 aa13.62□□□□□ -0.23
USB1-207ENST00000563149 LRRC37A2A6NM11 1700 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 A6NHS1 94 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 LACTBL1A8MY62 500 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 I3L4J1 428 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms