RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 GKN1Q9NS71 199 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 IL37Q9NZH6 218 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 HESX1Q9UBX0 185 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 MTF2Q9Y483 593 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-206ENST00000562610 ARIH1Q9Y4X5 557 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-206ENST00000562610 CPQQ9Y646 472 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 FAM92AA1XBS5 289 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 PES1O00541 588 aaKnown RBP17.02■□□□□ 0.32
COMMD4-206ENST00000562610 OLFM2O95897 454 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 VDRP11473 427 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 BCAT1P54687 386 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 PTPN5P54829 565 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 ITPRIPL2Q3MIP1 535 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 CT47A1Q5JQC4 288 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-206ENST00000562610 HECTD3Q5T447 861 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 TRIM65Q6PJ69 517 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 TTC30AQ86WT1 665 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 DTWD2Q8NBA8 298 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 FAM3CQ92520 227 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 MSANTD3Q96H12 275 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 RNF38Q9H0F5 515 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 C8orf33Q9H7E9 229 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-206ENST00000562610 CCSER2Q9H7U1 834 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 DUS2Q9NX74 493 aaKnown RBP17.02■□□□□ 0.32
COMMD4-206ENST00000562610 NFE2L3Q9Y4A8 694 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 WNT6Q9Y6F9 365 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 F5P12259 2224 aa17.02■□□□□ 0.32
COMMD4-206ENST00000562610 KCNJ18B7U540 433 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 SPECC1L-ADORA2AF8WAN1 911 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 LEFTY2O00292 366 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 COCHO43405 550 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 PAEPP09466 180 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 KRT5P13647 590 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 GLULP15104 373 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 ARSAP15289 507 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 SLC9A1P19634 815 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 CTHP32929 405 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 TUBP50607 506 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 SLC7A9P82251 487 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 BST2Q10589 180 aaKnown RBP17.01■□□□□ 0.31
COMMD4-206ENST00000562610 TCF15Q12870 199 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 KCNJ12Q14500 433 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 PDGFRLQ15198 375 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 EXOC3L4Q17RC7 722 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 C11orf57Q6ZUT1 292 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-206ENST00000562610 PIGZQ86VD9 579 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 ANKRD52Q8NB46 1076 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 KREMEN1Q96MU8 473 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 NELL2Q99435 816 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 FAM83CQ9BQN1 747 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 TUBGCP2Q9BSJ2 902 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 UBE2TQ9NPD8 197 aaPredicted RBP17.01■□□□□ 0.31
COMMD4-206ENST00000562610 HPS4Q9NQG7 708 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 SAMSN1Q9NSI8 373 aaKnown RBP17.01■□□□□ 0.31
COMMD4-206ENST00000562610 ANO10Q9NW15 660 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 SCML2Q9UQR0 700 aa17.01■□□□□ 0.31
COMMD4-206ENST00000562610 ATG2BQ96BY7 2078 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 GTPBP10A4D1E9 387 aaKnown RBP17■□□□□ 0.31
COMMD4-206ENST00000562610 SHISA7A6NL88 538 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 O00370 1275 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 SCAMP3O14828 347 aaKnown RBP17■□□□□ 0.31
COMMD4-206ENST00000562610 NCAM2O15394 837 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 TLR5O60602 858 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 ZDHHC11BP0C7U3 371 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 BRD2P25440 801 aaKnown RBP17■□□□□ 0.31
COMMD4-206ENST00000562610 KIF11P52732 1056 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 MFAP3P55082 362 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 PDE4CQ08493 712 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 RUNX3Q13761 415 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 SNX30Q5VWJ9 437 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 GJB7Q6PEY0 223 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 C1orf228Q6PIY5 440 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 RALGPS2Q86X27 583 aaPredicted RBP17■□□□□ 0.31
COMMD4-206ENST00000562610 DDX42Q86XP3 938 aaKnown RBP eCLIP17■□□□□ 0.31
COMMD4-206ENST00000562610 CPA6Q8N4T0 437 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 OSCP1Q8WVF1 389 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 ATP2A3Q93084 1043 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 FAM122AQ96E09 287 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 OSBPL6Q9BZF3 934 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 DLGAP2Q9P1A6 1054 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 TMEM63CQ9P1W3 806 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 CFAP97Q9P2B7 532 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 NAGPAQ9UK23 515 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 KIAA1257Q9ULG3 409 aa17■□□□□ 0.31
COMMD4-206ENST00000562610 A0A1W2PQH9 124 aa16.99■□□□□ 0.31
COMMD4-206ENST00000562610 H0Y858 1186 aa16.99■□□□□ 0.31
COMMD4-206ENST00000562610 M0QYV0 167 aa16.99■□□□□ 0.31
COMMD4-206ENST00000562610 RNF225M0QZC1 329 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-206ENST00000562610 XPO1O14980 1071 aaKnown RBP16.99■□□□□ 0.31
COMMD4-206ENST00000562610 CALCAP01258 141 aa16.99■□□□□ 0.31
COMMD4-206ENST00000562610 IRF1P10914 325 aa16.99■□□□□ 0.31
COMMD4-206ENST00000562610 TCF3P15923 654 aa16.99■□□□□ 0.31
COMMD4-206ENST00000562610 EEF1GP26641 437 aaKnown RBP16.99■□□□□ 0.31
COMMD4-206ENST00000562610 PGFP49763 221 aa16.99■□□□□ 0.31
COMMD4-206ENST00000562610 MLLT6P55198 1093 aaPredicted RBP16.99■□□□□ 0.31
COMMD4-206ENST00000562610 ZXDBP98169 803 aa16.99■□□□□ 0.31
COMMD4-206ENST00000562610 APBA1Q02410 837 aa16.99■□□□□ 0.31
COMMD4-206ENST00000562610 ARHGAP44Q17R89 818 aa16.99■□□□□ 0.31
COMMD4-206ENST00000562610 VWA3BQ502W6 1294 aa16.99■□□□□ 0.31
COMMD4-206ENST00000562610 CAVIN1Q6NZI2 390 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms