RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 CHADO15335 359 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 PRAMEF12O95522 483 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 SETSIPP0DME0 302 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 CLCN5P51795 746 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 ZNF132P52740 706 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 PLCB2Q00722 1185 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 FCHO2Q0JRZ9 810 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 BST2Q10589 180 aaKnown RBP17.31■□□□□ 0.36
PKD1-226ENST00000562425 ARHGAP44Q17R89 818 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 SNX30Q5VWJ9 437 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 LCLAT1Q6UWP7 414 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 GPIHBP1Q8IV16 184 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 SIX5Q8N196 739 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 USP13Q92995 863 aaPredicted RBP17.31■□□□□ 0.36
PKD1-226ENST00000562425 CYP2S1Q96SQ9 504 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 TRPV5Q9NQA5 729 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 TLR8Q9NR97 1041 aaKnown RBP17.31■□□□□ 0.36
PKD1-226ENST00000562425 LIMA1Q9UHB6 759 aaKnown RBP17.31■□□□□ 0.36
PKD1-226ENST00000562425 DNAJC12Q9UKB3 198 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 SCML2Q9UQR0 700 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 GVINP1Q7Z2Y8 2422 aa17.31■□□□□ 0.36
PKD1-226ENST00000562425 MYO15AQ9UKN7 3530 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 C2orf78A6NCI8 922 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 XPO1O14980 1071 aaKnown RBP17.3■□□□□ 0.36
PKD1-226ENST00000562425 MED7O43513 233 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 CAVIN2O95810 425 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 RFX1P22670 979 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 USP8P40818 1118 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 PSEN1P49768 467 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 KIF11P52732 1056 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 COPB1P53618 953 aaKnown RBP17.3■□□□□ 0.36
PKD1-226ENST00000562425 NCAPHQ15003 741 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 HECTD3Q5T447 861 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 CC2D1AQ6P1N0 951 aaPredicted RBP17.3■□□□□ 0.36
PKD1-226ENST00000562425 GJB7Q6PEY0 223 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 PIGZQ86VD9 579 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 TTC30AQ86WT1 665 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 ARL14EPQ8N8R7 260 aaPredicted RBP17.3■□□□□ 0.36
PKD1-226ENST00000562425 TMEM105Q8N8V8 129 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 RSPRY1Q96DX4 576 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 SMG9Q9H0W8 520 aaKnown RBP17.3■□□□□ 0.36
PKD1-226ENST00000562425 SIX2Q9NPC8 291 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 ARHGEF3Q9NR81 526 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 CA14Q9ULX7 337 aa17.3■□□□□ 0.36
PKD1-226ENST00000562425 WDR87Q6ZQQ6 2873 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 LRRC10BA6NIK2 292 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 STK25O00506 426 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 ZDHHC11BP0C7U3 371 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 ZNF18P17022 549 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 BRD2P25440 801 aaKnown RBP17.29■□□□□ 0.36
PKD1-226ENST00000562425 TUBP50607 506 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 TPM4P67936 248 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 PRKCQQ04759 706 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 PDE4CQ08493 712 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 KCNMA1Q12791 1236 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 SLC44A4Q53GD3 710 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 GPRIN1Q7Z2K8 1008 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 CCDC186Q7Z3E2 898 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 ARHGAP18Q8N392 663 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 UBA3Q8TBC4 463 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 CSGALNACT1Q8TDX6 532 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 TFAP2BQ92481 460 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 SHC3Q92529 594 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 FUCA2Q9BTY2 467 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 NACA2Q9H009 215 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 LRRC4Q9HBW1 653 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 GMIPQ9P107 970 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 ARHGAP26Q9UNA1 814 aa17.29■□□□□ 0.36
PKD1-226ENST00000562425 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.29■□□□□ 0.36
PKD1-226ENST00000562425 GREB1Q4ZG55 1949 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 OAS1P00973 400 aaKnown RBP17.28■□□□□ 0.36
PKD1-226ENST00000562425 TCF3P15923 654 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 PLA2G4AP47712 749 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 BPIFB4P59827 614 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 SLC7A9P82251 487 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 APBA1Q02410 837 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 PTK2Q05397 1052 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 MEA1Q16626 185 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 RAB41Q5JT25 222 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 KLHDC7AQ5VTJ3 777 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 TADA2BQ86TJ2 420 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 DDX42Q86XP3 938 aaKnown RBP eCLIP17.28■□□□□ 0.36
PKD1-226ENST00000562425 KCTD13Q8WZ19 329 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 SLC22A12Q96S37 553 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 LSM14BQ9BX40 385 aaKnown RBP17.28■□□□□ 0.36
PKD1-226ENST00000562425 PLCB1Q9NQ66 1216 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 CCL26Q9Y258 94 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 DAAM1Q9Y4D1 1078 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 USP3Q9Y6I4 520 aa17.28■□□□□ 0.36
PKD1-226ENST00000562425 KRBA1A5PL33 1030 aa17.27■□□□□ 0.36
PKD1-226ENST00000562425 PRR23AA6NEV1 266 aa17.27■□□□□ 0.36
PKD1-226ENST00000562425 LGALS16A8MUM7 142 aa17.27■□□□□ 0.36
PKD1-226ENST00000562425 M0QYV0 167 aa17.27■□□□□ 0.36
PKD1-226ENST00000562425 THAP12O43422 761 aa17.27■□□□□ 0.36
PKD1-226ENST00000562425 OLFM2O95897 454 aa17.27■□□□□ 0.36
PKD1-226ENST00000562425 MBL2P11226 248 aaPredicted RBP17.27■□□□□ 0.36
PKD1-226ENST00000562425 RALAP11233 206 aa17.27■□□□□ 0.36
PKD1-226ENST00000562425 GLULP15104 373 aa17.27■□□□□ 0.36
PKD1-226ENST00000562425 GNA15P30679 374 aa17.27■□□□□ 0.36
PKD1-226ENST00000562425 TKTL1P51854 596 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms