RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 CYP24A1Q07973 514 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 USP39Q53GS9 565 aaKnown RBP8.94□□□□□ -0.98
PALB2-202ENST00000561514 MDH1BQ5I0G3 518 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 FAM26FQ5R3K3 315 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 RHBDF2Q6PJF5 856 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 TMEM92Q6UXU6 159 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 FILIP1Q7Z7B0 1213 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 DDX42Q86XP3 938 aaKnown RBP eCLIP8.94□□□□□ -0.98
PALB2-202ENST00000561514 ETFBKMTQ8IXQ9 262 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 IL17RCQ8NAC3 791 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 MDGA1Q8NFP4 955 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 KCNV2Q8TDN2 545 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 SCFD1Q8WVM8 642 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 HPS3Q969F9 1004 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 OTUB2Q96DC9 234 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 C7orf25Q9BPX7 421 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 ZNF518BQ9C0D4 1074 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 ZSCAN16Q9H4T2 348 aaPredicted RBP8.94□□□□□ -0.98
PALB2-202ENST00000561514 MAGEF1Q9HAY2 307 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 CGNQ9P2M7 1197 aaKnown RBP8.94□□□□□ -0.98
PALB2-202ENST00000561514 CPQQ9Y646 472 aa8.94□□□□□ -0.98
PALB2-202ENST00000561514 DENND4CQ5VZ89 1909 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 E2F8A0AVK6 867 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 ANTXRLA6NF34 631 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 C4orf47A7E2U8 309 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 UPK3BL1B0FP48 263 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.93□□□□□ -0.98
PALB2-202ENST00000561514 UPK3BL2E5RIL1 263 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 TNFRSF10BO14763 440 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 ZNF500O60304 480 aaPredicted RBP8.93□□□□□ -0.98
PALB2-202ENST00000561514 ADAM23O75077 832 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 KAT7O95251 611 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 ADH1CP00326 375 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 CST3P01034 146 aaPredicted RBP8.93□□□□□ -0.98
PALB2-202ENST00000561514 PROS1P07225 676 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 PTPN1P18031 435 aaKnown RBP8.93□□□□□ -0.98
PALB2-202ENST00000561514 GNL1P36915 607 aaPredicted RBP8.93□□□□□ -0.98
PALB2-202ENST00000561514 GRIK1P39086 918 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 GRIA2P42262 883 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 CYP27A1Q02318 531 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 CREB5Q02930 508 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 TAF10Q12962 218 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 MAP7D1Q3KQU3 841 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 ANO7Q6IWH7 933 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 CYP2U1Q7Z449 544 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 C12orf40Q86WS4 652 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 SFTPA1Q8IWL2 248 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 XXYLT1Q8NBI6 393 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 B3GALNT2Q8NCR0 500 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 PDZD8Q8NEN9 1154 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 SLITRK1Q96PX8 696 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 FNBP1Q96RU3 617 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 PNKPQ96T60 521 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 B3GNT5Q9BYG0 378 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 DPEP3Q9H4B8 488 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 GRPEL1Q9HAV7 217 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 CD248Q9HCU0 757 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 COMMD8Q9NX08 183 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 TBC1D14Q9P2M4 693 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 R3HCC1Q9Y3T6 440 aaKnown RBP8.93□□□□□ -0.98
PALB2-202ENST00000561514 LAMA1P25391 3075 aa8.93□□□□□ -0.98
PALB2-202ENST00000561514 SGK1O00141 431 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 SPTLC2O15270 562 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 COCHO43405 550 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 STX6O43752 255 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 GREM1O60565 184 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 ALDH1A2O94788 518 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 RTN3O95197 1032 aaPredicted RBP8.92□□□□□ -0.98
PALB2-202ENST00000561514 YEATS4O95619 227 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 PDGFRBP09619 1106 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 ADH5P11766 374 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 CEACAM1P13688 526 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 YWHAQP27348 245 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 DPP6P42658 865 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 TNFRSF4P43489 277 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 TNNC1P63316 161 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 AMPD3Q01432 767 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 CEBPZQ03701 1054 aaKnown RBP8.92□□□□□ -0.98
PALB2-202ENST00000561514 WDR72Q3MJ13 1102 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 C2orf27AQ580R0 203 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 EOGTQ5NDL2 527 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 DAB2IPQ5VWQ8 1189 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 TDRD10Q5VZ19 366 aaKnown RBP8.92□□□□□ -0.98
PALB2-202ENST00000561514 PSAPL1Q6NUJ1 521 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 SHC4Q6S5L8 630 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 PAQR9Q6ZVX9 377 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 UNC13DQ70J99 1090 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 FAM35AQ86V20 835 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 ALLCQ8N6M5 410 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 PDILTQ8N807 584 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 KDF1Q8NAX2 398 aaPredicted RBP8.92□□□□□ -0.98
PALB2-202ENST00000561514 PLEKHO2Q8TD55 490 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 WHAMMQ8TF30 809 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 ZNF516Q92618 1163 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 SYAP1Q96A49 352 aaPredicted RBP8.92□□□□□ -0.98
PALB2-202ENST00000561514 PPP1R9BQ96SB3 815 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 MMS19Q96T76 1030 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 PANK2Q9BZ23 570 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 TPSD1Q9BZJ3 242 aa8.92□□□□□ -0.98
PALB2-202ENST00000561514 SNX25Q9H3E2 840 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms