RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 ZNF699Q32M78 642 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 ZNF528Q3MIS6 628 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 SPOPLQ6IQ16 392 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 C4orf50Q6ZRC1 276 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 VASH1Q7L8A9 365 aaPredicted RBP7.89□□□□□ -1.15
ZEB1-223ENST00000561304 MON1AQ86VX9 555 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 SLC9A9Q8IVB4 645 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 DCLK2Q8N568 766 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 CELF5Q8N6W0 485 aaKnown RBP7.89□□□□□ -1.15
ZEB1-223ENST00000561304 ARL14EPQ8N8R7 260 aaPredicted RBP7.89□□□□□ -1.15
ZEB1-223ENST00000561304 SUMF1Q8NBK3 374 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 OR6B3Q8NGW1 331 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 TMEM174Q8WUU8 243 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 NELL2Q99435 816 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 B3GNT5Q9BYG0 378 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 SNX25Q9H3E2 840 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 EBF3Q9H4W6 596 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 VRTNQ9H8Y1 702 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 TRPC7Q9HCX4 862 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.89□□□□□ -1.156e-7■■■■■ 162.5
ZEB1-223ENST00000561304 GKN1Q9NS71 199 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 TDP1Q9NUW8 608 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 MAGEC2Q9UBF1 373 aaPredicted RBP7.89□□□□□ -1.15
ZEB1-223ENST00000561304 USP25Q9UHP3 1055 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 MRPS17Q9Y2R5 130 aaKnown RBP7.89□□□□□ -1.15
ZEB1-223ENST00000561304 R3HCC1Q9Y3T6 440 aaKnown RBP7.89□□□□□ -1.15
ZEB1-223ENST00000561304 GPR179Q6PRD1 2367 aa7.89□□□□□ -1.15
ZEB1-223ENST00000561304 ANTXRLA6NF34 631 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 PDXKO00764 312 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 NCAM2O15394 837 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 AKAP3O75969 853 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 ZNF202O95125 648 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 MYL1P05976 194 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 PTPN1P18031 435 aaKnown RBP7.88□□□□□ -1.15
ZEB1-223ENST00000561304 GRIK1P39086 918 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 MLLT6P55198 1093 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-223ENST00000561304 TRPC3Q13507 836 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 NCOA4Q13772 614 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 CCINQ13939 588 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 ZNF268Q14587 947 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-223ENST00000561304 ITPRIPL2Q3MIP1 535 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 ZACNQ401N2 412 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 ZCWPW2Q504Y3 356 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 CEP135Q66GS9 1140 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 FSTL4Q6MZW2 842 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 ZC3H14Q6PJT7 736 aaKnown RBP7.88□□□□□ -1.15
ZEB1-223ENST00000561304 VSTM1Q6UX27 236 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 DENND5BQ6ZUT9 1274 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 PAQR9Q6ZVX9 377 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 RALGPS2Q86X27 583 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-223ENST00000561304 ZBTB44Q8NCP5 570 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 B3GALNT2Q8NCR0 500 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 TTC16Q8NEE8 873 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 GOLGA5Q8TBA6 731 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 MRPS31Q92665 395 aaKnown RBP7.88□□□□□ -1.15
ZEB1-223ENST00000561304 EZH1Q92800 747 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-223ENST00000561304 ERCC4Q92889 916 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-223ENST00000561304 SYAP1Q96A49 352 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-223ENST00000561304 SPATA17Q96L03 361 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 OCSTAMPQ9BR26 566 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 TTLL2Q9BWV7 592 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 SCAND2PQ9GZW5 306 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-223ENST00000561304 C8orf33Q9H7E9 229 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-223ENST00000561304 KIF9Q9HAQ2 790 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 APOBEC3GQ9HC16 384 aaKnown RBP7.88□□□□□ -1.15
ZEB1-223ENST00000561304 FBRSL1Q9HCM7 1045 aaKnown RBP7.88□□□□□ -1.15
ZEB1-223ENST00000561304 ATP13A2Q9NQ11 1180 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 POLR3BQ9NW08 1133 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-223ENST00000561304 UXTQ9UBK9 157 aaPredicted RBP7.88□□□□□ -1.15
ZEB1-223ENST00000561304 TRAF3IP3Q9Y228 551 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 WNT6Q9Y6F9 365 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 THADAQ6YHU6 1953 aa7.88□□□□□ -1.15
ZEB1-223ENST00000561304 TRAV19A0A0A6YYK7 116 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 A8MXQ7 604 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 K7ESF4 209 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 SCAMP3O14828 347 aaKnown RBP7.87□□□□□ -1.15
ZEB1-223ENST00000561304 PHACTR2O75167 634 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 BEST1O76090 585 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 HLA-DRAP01903 254 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 CKMP06732 381 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 CCDC130P13994 396 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 NR2F2P24468 414 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 ATICP31939 592 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 ASPAP45381 313 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 PGFP49763 221 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 NOP14P78316 857 aaKnown RBP7.87□□□□□ -1.15
ZEB1-223ENST00000561304 FAM160A1Q05DH4 1040 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 PPP3CAQ08209 521 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 IFRD2Q12894 506 aaPredicted RBP7.87□□□□□ -1.15
ZEB1-223ENST00000561304 SRSF5Q13243 272 aaKnown RBP7.87□□□□□ -1.15
ZEB1-223ENST00000561304 PNOCQ13519 176 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 RUNX3Q13761 415 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 MTF1Q14872 753 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 NFIL3Q16649 462 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 GAB4Q2WGN9 574 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 EML3Q32P44 896 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 ZNF667Q5HYK9 610 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 SV2AQ7L0J3 742 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 FAM35AQ86V20 835 aa7.87□□□□□ -1.15
ZEB1-223ENST00000561304 FUKQ8N0W3 1084 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms