RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 PSEN1P49768 467 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 TUBP50607 506 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 HTR4Q13639 388 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 ZNF268Q14587 947 aaPredicted RBP10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 GPR158Q5T848 1215 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 PMF1Q6P1K2 205 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 CACNA2D4Q7Z3S7 1137 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 IRF2BP2Q7Z5L9 587 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 TMEM110Q86TL2 294 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 WDTC1Q8N5D0 677 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 EPS8L1Q8TE68 723 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 ING5Q8WYH8 240 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 SMARCD2Q92925 531 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 SECISBP2LQ93073 1101 aaKnown RBP10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 E2F7Q96AV8 911 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 ELSPBP1Q96BH3 223 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 MCRS1Q96EZ8 462 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 ZSWIM3Q96MP5 696 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 SPAG5Q96R06 1193 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 UHRF1Q96T88 793 aaPredicted RBP10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 SLC4A5Q9BY07 1137 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 XPO4Q9C0E2 1151 aaKnown RBP10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 OBP2AQ9NY56 170 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 AIPL1Q9NZN9 384 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 TRPM5Q9NZQ8 1165 aa10.15□□□□□ -0.78
RABGGTA-221ENST00000561055 MIA3Q5JRA6 1907 aa10.15□□□□□ -0.79
RABGGTA-221ENST00000561055 TRIOO75962 3097 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 GFPT2O94808 682 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 CFHP08603 1231 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 CCDC172P0C7W6 258 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 FERP16591 822 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 FCARP24071 287 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 KRT9P35527 623 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 ACADSBP45954 432 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 PDE6CP51160 858 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 TKTL1P51854 596 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 FAM78AQ5JUQ0 283 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 TXNDC8Q6A555 127 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 KLHDC10Q6PID8 442 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 BHLHA9Q7RTU4 235 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 NOP9Q86U38 636 aaKnown RBP10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 RNF135Q8IUD6 432 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 ARID3BQ8IVW6 561 aaPredicted RBP10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 CMTM8Q8IZV2 173 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 KIAA1958Q8N8K9 716 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 ZSCAN18Q8TBC5 510 aaPredicted RBP10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 IRGQQ8WZA9 623 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 SYN2Q92777 582 aaPredicted RBP10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 FBXO32Q969P5 355 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 NECAB3Q96P71 396 aaPredicted RBP10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 NUCKS1Q9H1E3 243 aaKnown RBP10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 KCNK12Q9HB15 430 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 CNGB3Q9NQW8 809 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 TLR8Q9NR97 1041 aaKnown RBP10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 CLIC5Q9NZA1 410 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 LIMD1Q9UGP4 676 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 CHORDC1Q9UHD1 332 aaPredicted RBP10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 CYTH4Q9UIA0 394 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 NOCTQ9UK39 431 aaKnown RBP10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 CAPN11Q9UMQ6 739 aa10.14□□□□□ -0.79
RABGGTA-221ENST00000561055 AP5Z1O43299 807 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 FBXO21O94952 628 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 LSM8O95777 96 aaKnown RBP10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 ZBED1O96006 694 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 CYP1A1P04798 512 aaPredicted RBP10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 CHRNB2P17787 502 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 PRKCIP41743 596 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 DAOAP59103 153 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 SLC7A9P82251 487 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 ZBED6P86452 979 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 CYP4F8P98187 520 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 CDR2Q01850 454 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 ARID5BQ14865 1188 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 HECTD3Q5T447 861 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 STXBP5Q5T5C0 1151 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 DENND1BQ6P3S1 775 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 PARM1Q6UWI2 310 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 BEND5Q7L4P6 421 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 SCD5Q86SK9 330 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 ARHGAP18Q8N392 663 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 SLC44A3Q8N4M1 653 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 MAB21L3Q8N8X9 362 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 FGF14Q92915 247 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 SLC22A12Q96S37 553 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 SYT11Q9BT88 431 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 ULBP1Q9BZM6 244 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 RNF38Q9H0F5 515 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 KIF9Q9HAQ2 790 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 LRRC4Q9HBW1 653 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 ZFP14Q9HCL3 533 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 TDP1Q9NUW8 608 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 SORCS3Q9UPU3 1222 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 TECTAO75443 2155 aa10.13□□□□□ -0.79
RABGGTA-221ENST00000561055 TRAV19A0A0A6YYK7 116 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 C2orf78A6NCI8 922 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 LRRC53A6NM62 1247 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 SART1O43290 800 aaKnown RBP10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 GYPCP04921 128 aa10.12□□□□□ -0.79
RABGGTA-221ENST00000561055 MMEP08473 750 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms