RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 APEX2Q9UBZ4 518 aa9.53□□□□□ -0.88
SNRPA1-214ENST00000560987 DNAJC12Q9UKB3 198 aa9.53□□□□□ -0.88
SNRPA1-214ENST00000560987 ZNF840PA6NDX5 716 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 SOBPA7XYQ1 873 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 TNFRSF10BO14763 440 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 MED7O43513 233 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 PDGFBP01127 241 aaPredicted RBP9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 MBL2P11226 248 aaPredicted RBP9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 FCARP24071 287 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 AVPR2P30518 371 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 NUBP1P53384 320 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 TPM4P67936 248 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 NHLH1Q02575 133 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 UBXN1Q04323 297 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 PDE4CQ08493 712 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 BST2Q10589 180 aaKnown RBP9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 RAPGEF1Q13905 1077 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 KRT31Q15323 416 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 CNGA2Q16280 664 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 ARHGAP29Q52LW3 1261 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 MIIPQ5JXC2 388 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 HECTD3Q5T447 861 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 ARHGAP17Q68EM7 881 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 ZMIZ2Q8NF64 920 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 OVCA2Q8WZ82 227 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 USP13Q92995 863 aaPredicted RBP9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 ASIC4Q96FT7 647 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 ZFYVE19Q96K21 471 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 LSM14BQ9BX40 385 aaKnown RBP9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 PDCL3Q9H2J4 239 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 LRRC4Q9HBW1 653 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 SLC2A4RGQ9NR83 387 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 GMIPQ9P107 970 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 TSPAN16Q9UKR8 245 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 CCL26Q9Y258 94 aa9.52□□□□□ -0.89
SNRPA1-214ENST00000560987 KRBA1A5PL33 1030 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 GOLGA6L19H0YKK7 550 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 M0QYV0 167 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 FOXN3O00409 490 aaPredicted RBP9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 PIK3R2O00459 728 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 CHADO15335 359 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 PRAMEF12O95522 483 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 RALAP11233 206 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 LCP1P13796 627 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 CD72P21854 359 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 WEE1P30291 646 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 KRT9P35527 623 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 MRE11P49959 708 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 TKTL1P51854 596 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 KIF11P52732 1056 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 COPB1P53618 953 aaKnown RBP9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 BCAT1P54687 386 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 PLCB2Q00722 1185 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 PTK2Q05397 1052 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 KCNMA1Q12791 1236 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 STILQ15468 1287 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 FILIP1LQ4L180 1135 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 CDKAL1Q5VV42 579 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 LCLAT1Q6UWP7 414 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 GPRIN1Q7Z2K8 1008 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 PIGZQ86VD9 579 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 TTC30AQ86WT1 665 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 SH3RF2Q8TEC5 729 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 TFAP2BQ92481 460 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 RSPRY1Q96DX4 576 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 SLC22A12Q96S37 553 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 UBXN6Q9BZV1 441 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 RNF38Q9H0F5 515 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 KIF9Q9HAQ2 790 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 ARHGEF3Q9NR81 526 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 HEBP1Q9NRV9 189 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 DUS2Q9NX74 493 aaKnown RBP9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 SMPD4Q9NXE4 827 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 OBP2AQ9NY56 170 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 IL37Q9NZH6 218 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 NAGPAQ9UK23 515 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 SCML2Q9UQR0 700 aa9.51□□□□□ -0.89
SNRPA1-214ENST00000560987 A0A1W2PQH9 124 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 FAM170BA6NMN3 283 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 HHLA1C9JL84 531 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 LEFTY2O00292 366 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 O00370 1275 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 XPO1O14980 1071 aaKnown RBP9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 CYP26A1O43174 497 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 TADA3O75528 432 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 SERPINC1P01008 464 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 IRF1P10914 325 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 RARGP13631 454 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 PFKLP17858 780 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 GNA15P30679 374 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 ATP5C1P36542 298 aaKnown RBP9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 IFNAR2P48551 515 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 RGS7P49802 495 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 BPIFB4P59827 614 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 NR1H3Q13133 447 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 DRAP1Q14919 205 aaPredicted RBP9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 UBXN2BQ14CS0 331 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 MLF2Q15773 248 aaPredicted RBP9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 ZSCAN23Q3MJ62 389 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 C10orf120Q5SQS8 335 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms