RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 OSBPL6Q9BZF3 934 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 SLITRK6Q9H5Y7 841 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 CWH43Q9H720 699 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 ARMT1Q9H993 441 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 SMURF1Q9HCE7 757 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 PRMT8Q9NR22 394 aaPredicted RBP4.38□□□□□ -1.71
HERC1-211ENST00000560983 ATP8A2Q9NTI2 1148 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 SETD4Q9NVD3 440 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 GALNT8Q9NY28 637 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 MTMR4Q9NYA4 1195 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 EPS15L1Q9UBC2 864 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 DBNLQ9UJU6 430 aaKnown RBP4.38□□□□□ -1.71
HERC1-211ENST00000560983 FBXO10Q9UK96 956 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 CCPG1Q9ULG6 757 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 SYNPO2Q9UMS6 1093 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 ATP23Q9Y6H3 246 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 FPGT-TNNI3KV9GXZ4 949 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 PTPRCP08575 1304 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 CACNA1IQ9P0X4 2223 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 KALRNO60229 2985 aa4.38□□□□□ -1.71
HERC1-211ENST00000560983 CNOT1A5YKK6 2376 aaKnown RBP4.38□□□□□ -1.71
HERC1-211ENST00000560983 HECTD1Q9ULT8 2610 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 ESYT3A0FGR9 886 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 PTPDC1A2A3K4 754 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 SHISA7A6NL88 538 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 ANHXE9PGG2 379 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 MAFO75444 373 aaPredicted RBP4.37□□□□□ -1.71
HERC1-211ENST00000560983 KRT38O76015 456 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 PYGMP11217 842 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 PDE6AP16499 860 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 NAT1P18440 290 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 CR2P20023 1033 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 CD72P21854 359 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 MCCP23508 829 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 GPC5P78333 572 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 GABREP78334 506 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 SP2Q02086 613 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 TROAPQ12815 778 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 MTAPQ13126 283 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 WTAPQ15007 396 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 SF3A2Q15428 464 aaKnown RBP4.37□□□□□ -1.71
HERC1-211ENST00000560983 TBR1Q16650 682 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 LONRF2Q1L5Z9 754 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 SLC9C2Q5TAH2 1124 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 KANK2Q63ZY3 851 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 TMEM200BQ69YZ2 307 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 LRRC55Q6ZSA7 311 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 CCDC149Q6ZUS6 474 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 LARP4Q71RC2 724 aaKnown RBP eCLIP4.37□□□□□ -1.71
HERC1-211ENST00000560983 THNSL1Q8IYQ7 743 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 GIMAP8Q8ND71 665 aaPredicted RBP4.37□□□□□ -1.71
HERC1-211ENST00000560983 CHMP4CQ96CF2 233 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 MYADMQ96S97 322 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 ADOQ96SZ5 270 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 MEIS3Q99687 375 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 RPP25Q9BUL9 199 aaKnown RBP4.37□□□□□ -1.71
HERC1-211ENST00000560983 MENTQ9BUN1 341 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 AMNQ9BXJ7 453 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 RANBP17Q9H2T7 1088 aaKnown RBP4.37□□□□□ -1.71
HERC1-211ENST00000560983 TMX1Q9H3N1 280 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 ENTPD7Q9NQZ7 604 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 PUF60Q9UHX1 559 aaKnown RBP4.37□□□□□ -1.71
HERC1-211ENST00000560983 RAB23Q9ULC3 237 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 RAI2Q9Y5P3 530 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 FRMPD2Q68DX3 1309 aaPredicted RBP4.37□□□□□ -1.71
HERC1-211ENST00000560983 ZNF532Q9HCE3 1301 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 LAMA1P25391 3075 aa4.37□□□□□ -1.71
HERC1-211ENST00000560983 FANCMQ8IYD8 2048 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 COL4A3Q01955 1670 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 PNMA6EA0A0J9YXQ4 647 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 PMS2P1A4D2B8 440 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 FAM221BA6H8Z2 402 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 EIF4E1BA6NMX2 242 aaKnown RBP4.36□□□□□ -1.71
HERC1-211ENST00000560983 TBKBP1A7MCY6 615 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 ARHGAP6O43182 974 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 CXCL14O95715 111 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 TTLL1O95922 423 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 ZNF806P0C7X5 589 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 STAG3L1P0CL83 205 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 SCG2P13521 617 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 CD52P31358 61 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 SLC1A4P43007 532 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 NOVA1P51513 510 aaKnown RBP4.36□□□□□ -1.71
HERC1-211ENST00000560983 JAM2P57087 298 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 SRSF5Q13243 272 aaKnown RBP4.36□□□□□ -1.71
HERC1-211ENST00000560983 G3BP1Q13283 466 aaKnown RBP eCLIP4.36□□□□□ -1.71
HERC1-211ENST00000560983 SIM2Q14190 667 aaPredicted RBP4.36□□□□□ -1.71
HERC1-211ENST00000560983 SMC1AQ14683 1233 aaKnown RBP4.36□□□□□ -1.71
HERC1-211ENST00000560983 NONOQ15233 471 aaKnown RBP eCLIP4.36□□□□□ -1.71
HERC1-211ENST00000560983 SEC23AQ15436 765 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 AASDHQ4L235 1098 aaPredicted RBP4.36□□□□□ -1.71
HERC1-211ENST00000560983 SLC44A4Q53GD3 710 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 FAM209AQ5JX71 171 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 CELF3Q5SZQ8 465 aaKnown RBP4.36□□□□□ -1.71
HERC1-211ENST00000560983 SPOUT1Q5T280 376 aaKnown RBP4.36□□□□□ -1.71
HERC1-211ENST00000560983 IGFL4Q6B9Z1 124 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 OSTM1Q86WC4 334 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 PTRH1Q86Y79 214 aaKnown RBP4.36□□□□□ -1.71
HERC1-211ENST00000560983 NOSTRINQ8IVI9 506 aa4.36□□□□□ -1.71
HERC1-211ENST00000560983 AMER2Q8N7J2 671 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms