RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 SCYL2Q6P3W7 929 aa15.25■□□□□ 0.03
CRTC3-210ENST00000560927 RGS9BPQ6ZS82 235 aa15.25■□□□□ 0.03
CRTC3-210ENST00000560927 ACOT1Q86TX2 421 aa15.25■□□□□ 0.03
CRTC3-210ENST00000560927 TTC30AQ86WT1 665 aa15.25■□□□□ 0.03
CRTC3-210ENST00000560927 LPIN3Q9BQK8 851 aa15.25■□□□□ 0.03
CRTC3-210ENST00000560927 TUT1Q9H6E5 874 aaKnown RBP15.25■□□□□ 0.03
CRTC3-210ENST00000560927 BAIAP2L1Q9UHR4 511 aa15.25■□□□□ 0.03
CRTC3-210ENST00000560927 ADRA1DP25100 572 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 CA9Q16790 459 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 OLFML1Q6UWY5 402 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 SCUBE3Q8IX30 993 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 AGGF1Q8N302 714 aaeCLIP15.24■□□□□ 0.035e-7■■■■□ 25.5
CRTC3-210ENST00000560927 PPP1R13LQ8WUF5 828 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 KLHL29Q96CT2 875 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 ZMAT2Q96NC0 199 aaKnown RBP15.24■□□□□ 0.03
CRTC3-210ENST00000560927 RNF157Q96PX1 679 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 USP29Q9HBJ7 922 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 NOD2Q9HC29 1040 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 NGRNQ9NPE2 291 aaKnown RBP15.24■□□□□ 0.03
CRTC3-210ENST00000560927 FETUBQ9UGM5 382 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 GINS2Q9Y248 185 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 H7C0C1 242 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 EDF1O60869 148 aaKnown RBP15.24■□□□□ 0.03
CRTC3-210ENST00000560927 GABBR2O75899 941 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 ATP5OP48047 213 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 TMEM62Q0P6H9 643 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 KCNJ11Q14654 390 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 KIZQ2M2Z5 673 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 KLHL38Q2WGJ6 581 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 HHATQ5VTY9 493 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 PLD5Q8N7P1 536 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 SHCBP1Q8NEM2 672 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 LRRC8CQ8TDW0 803 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 KHSRPQ92945 711 aaKnown RBP eCLIP15.24■□□□□ 0.03
CRTC3-210ENST00000560927 B3GNT5Q9BYG0 378 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 SNX9Q9Y5X1 595 aa15.24■□□□□ 0.03
CRTC3-210ENST00000560927 LOC102724159A0A0B4J2E5 919 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 WDR91A4D1P6 747 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 KBTBD13C9JR72 458 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 HCRTO43612 131 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 KRT16P08779 473 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 TFE3P19532 575 aaPredicted RBP15.23■□□□□ 0.03
CRTC3-210ENST00000560927 STIP1P31948 543 aaKnown RBP15.23■□□□□ 0.03
CRTC3-210ENST00000560927 RDXP35241 583 aaKnown RBP15.23■□□□□ 0.03
CRTC3-210ENST00000560927 MSH2P43246 934 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 KRT81Q14533 505 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 PWP2Q15269 919 aaKnown RBP15.23■□□□□ 0.03
CRTC3-210ENST00000560927 FAXCQ5TGI0 409 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 ASRGL1Q7L266 308 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 CEP57Q86XR8 500 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 PQLC3Q8N755 202 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.23■□□□□ 0.03
CRTC3-210ENST00000560927 FAM172AQ8WUF8 416 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 KATNBL1Q9H079 304 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 MYLK2Q9H1R3 596 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 SLC17A7Q9P2U7 560 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 HES2Q9Y543 173 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 HEY1Q9Y5J3 304 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 SCN1AP35498 2009 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 TCRBV9S1A1TA0A576 114 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 NPTXRO95502 500 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 STAU1O95793 577 aaKnown RBP15.23■□□□□ 0.03
CRTC3-210ENST00000560927 IBSPP21815 317 aaPredicted RBP15.23■□□□□ 0.03
CRTC3-210ENST00000560927 E2F5Q15329 346 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 GRIK4Q16099 956 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 KYAT1Q16773 422 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 PKDCCQ504Y2 493 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 GPRC5AQ8NFJ5 357 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 TCP10LQ8TDR4 215 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 ZNF75CPQ92670 426 aaPredicted RBP15.23■□□□□ 0.03
CRTC3-210ENST00000560927 FAF2Q96CS3 445 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.23■□□□□ 0.03
CRTC3-210ENST00000560927 SNTG2Q9NY99 539 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 TUBGCP4Q9UGJ1 667 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 CHKBQ9Y259 395 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 TEX264Q9Y6I9 313 aa15.23■□□□□ 0.03
CRTC3-210ENST00000560927 A8MUI8 341 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 KCNN4O15554 427 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 GRM5P41594 1212 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 TFDP2Q14188 446 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 KBTBD12Q3ZCT8 623 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 FAM47CQ5HY64 1035 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 GLRA4Q5JXX5 417 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 OTOAQ7RTW8 1153 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 ZNF276Q8N554 614 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 BANPQ8N9N5 519 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 PCDH19Q8TAB3 1148 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 C18orf25Q96B23 403 aaPredicted RBP15.22■□□□□ 0.03
CRTC3-210ENST00000560927 ERP27Q96DN0 273 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 SNRNP25Q9BV90 132 aaKnown RBP15.22■□□□□ 0.03
CRTC3-210ENST00000560927 PCDH18Q9HCL0 1135 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 SSU72Q9NP77 194 aaKnown RBP15.22■□□□□ 0.03
CRTC3-210ENST00000560927 VTA1Q9NP79 307 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 ARHGEF3Q9NR81 526 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 RAB6BQ9NRW1 208 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 KIAA1257Q9ULG3 409 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 CITO14578 2027 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 COL1A2P08123 1366 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 TRIP11Q15643 1979 aa15.22■□□□□ 0.03
CRTC3-210ENST00000560927 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms