RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 CNGA2Q16280 664 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 GOLGA7BQ2TAP0 167 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 ARHGAP29Q52LW3 1261 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 LCLAT1Q6UWP7 414 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 ENOSF1Q7L5Y1 443 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 APTXQ7Z2E3 356 aaKnown RBP16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 PIGZQ86VD9 579 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 TMEM105Q8N8V8 129 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 PDZD8Q8NEN9 1154 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 SHC3Q92529 594 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 ZFYVE19Q96K21 471 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 FBXO44Q9H4M3 255 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 TBC1D17Q9HA65 648 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 HEBP1Q9NRV9 189 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 OSER1Q9NX31 292 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 TAB2Q9NYJ8 693 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 RAPGEFL1Q9UHV5 662 aa16.12■□□□□ 0.17
SNRPA1-213ENST00000560856 LRRC10BA6NIK2 292 aa16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 CKMP06732 381 aa16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 BRD2P25440 801 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 BCAT1P54687 386 aa16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 PRKCQQ04759 706 aa16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 ANO6Q4KMQ2 910 aa16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 SMYD5Q6GMV2 418 aa16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 ASTLQ6HA08 431 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 CCDC186Q7Z3E2 898 aa16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 SCD5Q86SK9 330 aa16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 UBA3Q8TBC4 463 aa16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 ZFRQ96KR1 1074 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 NMUR1Q9HB89 426 aa16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 GKN1Q9NS71 199 aa16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 CACNA1HO95180 2353 aa16.11■□□□□ 0.17
SNRPA1-213ENST00000560856 XPO1O14980 1071 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 CYP26A1O43174 497 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 COCHO43405 550 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 ABL1P00519 1130 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 AOC1P19801 751 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 COL9A1P20849 921 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 TUBP50607 506 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 PDE6CP51160 858 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 MFAP3P55082 362 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 TNK2Q07912 1038 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 BST2Q10589 180 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 HECTD3Q5T447 861 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 BHLHA9Q7RTU4 235 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 SUGP1Q8IWZ8 645 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 YAF2Q8IY57 180 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 ZNF687Q8N1G0 1237 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 FLCNQ8NFG4 579 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 SH3RF2Q8TEC5 729 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 SLC35F5Q8WV83 523 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 FAM81BQ96LP2 452 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 BPIFA3Q9BQP9 254 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 FOXQ1Q9C009 403 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 VPS16Q9H269 839 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 MFSD1Q9H3U5 465 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 CCSER2Q9H7U1 834 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 ACP6Q9NPH0 428 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 HPS4Q9NQG7 708 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 LIMA1Q9UHB6 759 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 DNAJC12Q9UKB3 198 aa16.1■□□□□ 0.17
SNRPA1-213ENST00000560856 OTOL1A6NHN0 477 aaPredicted RBP16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 CD72P21854 359 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 PLA2G4AP47712 749 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 MLLT6P55198 1093 aaPredicted RBP16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 PLCB2Q00722 1185 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 MTF1Q14872 753 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 STILQ15468 1287 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 ARHGAP44Q17R89 818 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 KLHDC7AQ5VTJ3 777 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 PM20D1Q6GTS8 502 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 TPRG1Q6ZUI0 275 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 DHX40Q8IX18 779 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 ZNF276Q8N554 614 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 AOPEPQ8N6M6 819 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 KCTD13Q8WZ19 329 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 SHDQ96IW2 340 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 NAA15Q9BXJ9 866 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 CYLDQ9NQC7 956 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 TLR8Q9NR97 1041 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 GTSE1Q9NYZ3 720 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 DLGAP2Q9P1A6 1054 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 HESX1Q9UBX0 185 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 MTF2Q9Y483 593 aaPredicted RBP16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 CPQQ9Y646 472 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 KMT2EQ8IZD2 1858 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 TICRRQ7Z2Z1 1910 aa16.09■□□□□ 0.17
SNRPA1-213ENST00000560856 A0A1W2PQH9 124 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 KANSL1LA0AUZ9 987 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 LEFTY2O00292 366 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 FOXN3O00409 490 aaPredicted RBP16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 SETSIPP0DME0 302 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 KRT5P13647 590 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 GLULP15104 373 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 ARSAP15289 507 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 PTMSP20962 102 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 COPB1P53618 953 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 FZD5Q13467 585 aa16.08■□□□□ 0.16
SNRPA1-213ENST00000560856 TRIM68Q6AZZ1 485 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms