RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 DENND1AQ8TEH3 1009 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 C10orf82Q8WW14 230 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 PSPC1Q8WXF1 523 aaKnown RBP8.94□□□□□ -0.98
CCDC33-209ENST00000560565 KRT35Q92764 455 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 COPS5Q92905 334 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 PPP2R3CQ969Q6 453 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 ZBTB10Q96DT7 871 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 FAM167BQ9BTA0 163 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 RUSC1Q9BVN2 902 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 NIFKQ9BYG3 293 aaKnown RBP8.94□□□□□ -0.98
CCDC33-209ENST00000560565 UBE2OQ9C0C9 1292 aaKnown RBP8.94□□□□□ -0.98
CCDC33-209ENST00000560565 IQCGQ9H095 443 aaKnown RBP8.94□□□□□ -0.98
CCDC33-209ENST00000560565 WWP1Q9H0M0 922 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 EPB41L1Q9H4G0 881 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 TMEM8AQ9HCN3 771 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 PDLIM7Q9NR12 457 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 TMEM39AQ9NV64 488 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 RAB20Q9NX57 234 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 CHCHD3Q9NX63 227 aaKnown RBP8.94□□□□□ -0.98
CCDC33-209ENST00000560565 EURLQ9NYK6 297 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 DLGAP2Q9P1A6 1054 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 WRAP73Q9P2S5 460 aaPredicted RBP8.94□□□□□ -0.98
CCDC33-209ENST00000560565 HAO1Q9UJM8 370 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 NOCTQ9UK39 431 aaKnown RBP8.94□□□□□ -0.98
CCDC33-209ENST00000560565 CHKBQ9Y259 395 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 C2CD2Q9Y426 696 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 NR2E1Q9Y466 385 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 PCDHB2Q9Y5E7 798 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 UMODL1Q5DID0 1318 aa8.94□□□□□ -0.98
CCDC33-209ENST00000560565 TRIM43BA6NCK2 446 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 A6NJR5 290 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 NOP56O00567 594 aaKnown RBP8.93□□□□□ -0.98
CCDC33-209ENST00000560565 ALOX15BO15296 676 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 CLDN3O15551 220 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 ZNF862O60290 1169 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 KPNA6O60684 536 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 PROSCO94903 275 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 STBD1O95210 358 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 PSMG1O95456 288 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 MYL3P08590 195 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 CYP11B1P15538 503 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 RAG1P15918 1043 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 TARSP26639 723 aaKnown RBP8.93□□□□□ -0.98
CCDC33-209ENST00000560565 HOXD13P35453 343 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 CASP4P49662 377 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 GPC3P51654 580 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 STAT5BP51692 787 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 CACNA2D1P54289 1103 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 CDK16Q00536 496 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 PRKCEQ02156 737 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 FAAP100Q0VG06 881 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 ITGA7Q13683 1181 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 UGCGQ16739 394 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 CBWD6Q4V339 395 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 XKR9Q5GH70 373 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 WDR44Q5JSH3 913 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 CBWD3Q5JTY5 395 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 CBWD5Q5RIA9 395 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 RASIP1Q5U651 963 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 SWSAP1Q6NVH7 229 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 ZC3H18Q86VM9 953 aaKnown RBP8.93□□□□□ -0.98
CCDC33-209ENST00000560565 GPIHBP1Q8IV16 184 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 CCDC60Q8IWA6 550 aaPredicted RBP8.93□□□□□ -0.98
CCDC33-209ENST00000560565 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.93□□□□□ -0.98
CCDC33-209ENST00000560565 PDCD7Q8N8D1 485 aaKnown RBP8.93□□□□□ -0.98
CCDC33-209ENST00000560565 CATSPER1Q8NEC5 780 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 SPIRE2Q8WWL2 714 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 IRGQQ8WZA9 623 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 ZNF75CPQ92670 426 aaPredicted RBP8.93□□□□□ -0.98
CCDC33-209ENST00000560565 TRIM43Q96BQ3 446 aaPredicted RBP8.93□□□□□ -0.98
CCDC33-209ENST00000560565 FAM136AQ96C01 138 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 GPR20Q99678 358 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 SEZ6LQ9BYH1 1024 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 FGFBP2Q9BYJ0 223 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 C1orf21Q9H246 121 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 SMARCAD1Q9H4L7 1026 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 PCDH9Q9HC56 1237 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 AAASQ9NRG9 546 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 NMRK1Q9NWW6 199 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 NDE1Q9NXR1 346 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 KCNK4Q9NYG8 393 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 IP6K2Q9UHH9 426 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 ANAPC7Q9UJX3 599 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 COQ4Q9Y3A0 265 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 NEU2Q9Y3R4 380 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 SCN10AQ9Y5Y9 1956 aa8.93□□□□□ -0.98
CCDC33-209ENST00000560565 ANK1P16157 1881 aa8.92□□□□□ -0.98
CCDC33-209ENST00000560565 COL1A2P08123 1366 aa8.92□□□□□ -0.98
CCDC33-209ENST00000560565 K7ENM7 598 aa8.92□□□□□ -0.98
CCDC33-209ENST00000560565 CAPN9O14815 690 aa8.92□□□□□ -0.98
CCDC33-209ENST00000560565 KIAA0355O15063 1070 aa8.92□□□□□ -0.98
CCDC33-209ENST00000560565 TLR3O15455 904 aaKnown RBP8.92□□□□□ -0.98
CCDC33-209ENST00000560565 SKAP2O75563 359 aaPredicted RBP8.92□□□□□ -0.98
CCDC33-209ENST00000560565 ZNF189O75820 626 aaPredicted RBP8.92□□□□□ -0.98
CCDC33-209ENST00000560565 FAM155BO75949 473 aa8.92□□□□□ -0.98
CCDC33-209ENST00000560565 MYL4P12829 197 aa8.92□□□□□ -0.98
CCDC33-209ENST00000560565 PLS3P13797 630 aa8.92□□□□□ -0.98
CCDC33-209ENST00000560565 CPA3P15088 417 aa8.92□□□□□ -0.98
CCDC33-209ENST00000560565 IVDP26440 423 aa8.92□□□□□ -0.98
CCDC33-209ENST00000560565 TCF7P36402 384 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms