RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 TXNRD3NBQ6F5E7 133 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 OR6B2Q6IFH4 312 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 CCDC121Q6ZUS5 278 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 PIGWQ7Z7B1 504 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 RFX6Q8HWS3 928 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 PSTKQ8IV42 348 aaKnown RBP10.15□□□□□ -0.78
RTF1-206ENST00000560447 NAT8LQ8N9F0 302 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 ATP11CQ8NB49 1132 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 SLC35F5Q8WV83 523 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 RXFP2Q8WXD0 754 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 MAML1Q92585 1016 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 HAUS1Q96CS2 278 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 FAF2Q96CS3 445 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 ZNF668Q96K58 619 aaPredicted RBP10.15□□□□□ -0.78
RTF1-206ENST00000560447 ZNF670Q9BS34 389 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 MAK16Q9BXY0 300 aaKnown RBP10.15□□□□□ -0.78
RTF1-206ENST00000560447 SAYSD1Q9NPB0 183 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 NKIRAS1Q9NYS0 192 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 HMGXB4Q9UGU5 601 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 DDX20Q9UHI6 824 aaKnown RBP10.15□□□□□ -0.78
RTF1-206ENST00000560447 GTF2IRD1Q9UHL9 959 aa10.15□□□□□ -0.78
RTF1-206ENST00000560447 EXOC1LA0A1B0GW35 172 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 GRXCR2A6NFK2 248 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 MANSC4A6NHS7 340 aaPredicted RBP10.14□□□□□ -0.79
RTF1-206ENST00000560447 E5RJQ4 531 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 PIRO00625 290 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 CHADO15335 359 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 PFKMP08237 780 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 GSTA2P09210 222 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 BRAFP15056 766 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 PAX3P23760 479 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 HOXC8P31273 242 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 SDC4P31431 198 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 MAGEA6P43360 314 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 VPS41P49754 854 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 CRYBB1P53674 252 aaPredicted RBP10.14□□□□□ -0.79
RTF1-206ENST00000560447 EIF3EP60228 445 aaKnown RBP10.14□□□□□ -0.79
RTF1-206ENST00000560447 ROR1Q01973 937 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 BST2Q10589 180 aaKnown RBP10.14□□□□□ -0.79
RTF1-206ENST00000560447 XRCC4Q13426 336 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 LLGL1Q15334 1064 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 EFHC2Q5JST6 749 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 C9orf57Q5W0N0 161 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 MAP1SQ66K74 1059 aaPredicted RBP10.14□□□□□ -0.79
RTF1-206ENST00000560447 OLFML1Q6UWY5 402 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 VSTM1Q6UX27 236 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 RGS9BPQ6ZS82 235 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 FAM183BPQ6ZVS7 135 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 SLC26A9Q7LBE3 791 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 C10orf67Q8IYJ2 551 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 GBP7Q8N8V2 638 aaPredicted RBP10.14□□□□□ -0.79
RTF1-206ENST00000560447 ANKRD52Q8NB46 1076 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 NPLOC4Q8TAT6 608 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 CKAP2Q8WWK9 683 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 APBB2Q92870 758 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 ALKBH8Q96BT7 664 aaKnown RBP10.14□□□□□ -0.79
RTF1-206ENST00000560447 TNIP3Q96KP6 325 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 MAGEB18Q96M61 343 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 RNF157Q96PX1 679 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 TRIM6Q9C030 488 aaPredicted RBP10.14□□□□□ -0.79
RTF1-206ENST00000560447 ZWILCHQ9H900 591 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 LRRC4CQ9HCJ2 640 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 KLHL11Q9NVR0 708 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 SNTG2Q9NY99 539 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 PAK5Q9P286 719 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 RCOR3Q9P2K3 495 aaPredicted RBP10.14□□□□□ -0.79
RTF1-206ENST00000560447 ZMYND8Q9ULU4 1186 aaPredicted RBP10.14□□□□□ -0.79
RTF1-206ENST00000560447 NAALADL1Q9UQQ1 740 aa10.14□□□□□ -0.79
RTF1-206ENST00000560447 CLUHO75153 1309 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 TMEM120BA0PK00 339 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 BCLAF3A2AJT9 711 aaKnown RBP10.13□□□□□ -0.79
RTF1-206ENST00000560447 SMIM23A6NLE4 172 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 FAM155BO75949 473 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 ZNF865P0CJ78 1059 aaPredicted RBP10.13□□□□□ -0.79
RTF1-206ENST00000560447 RBP3P10745 1247 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 WARSP23381 471 aaKnown RBP10.13□□□□□ -0.79
RTF1-206ENST00000560447 LRPAP1P30533 357 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 RPL22P35268 128 aaKnown RBP10.13□□□□□ -0.79
RTF1-206ENST00000560447 RGS2P41220 211 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 SLCO1A2P46721 670 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 NR2C2P49116 596 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 CTCFP49711 727 aaPredicted RBP10.13□□□□□ -0.79
RTF1-206ENST00000560447 TAF6P49848 677 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 CDH6P55285 790 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 IL9RQ01113 521 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 RNASELQ05823 741 aaKnown RBP10.13□□□□□ -0.79
RTF1-206ENST00000560447 DPYSL3Q14195 570 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 SKIDA1Q1XH10 827 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 FBXO47Q5MNV8 452 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 SLC9A4Q6AI14 798 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 TAF2Q6P1X5 1199 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 CYP4V2Q6ZWL3 525 aaPredicted RBP10.13□□□□□ -0.79
RTF1-206ENST00000560447 BZW1Q7L1Q6 419 aaKnown RBP10.13□□□□□ -0.79
RTF1-206ENST00000560447 STRADAQ7RTN6 431 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 TLK2Q86UE8 772 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 TRABD2AQ86V40 505 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 CCDC13Q8IYE1 715 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 HACE1Q8IYU2 909 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 PDIK1LQ8N165 341 aa10.13□□□□□ -0.79
RTF1-206ENST00000560447 TOP6BLQ8N6T0 577 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms