RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 LMO3Q8TAP4 145 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 TMEM176AQ96HP8 235 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 FAXDC2Q96IV6 333 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 IRF2BPLQ9H1B7 796 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 CCSER2Q9H7U1 834 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 FBRSL1Q9HCM7 1045 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 DUS2Q9NX74 493 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 RWDD2AQ9UIY3 292 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 CPQQ9Y646 472 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 MYOFQ9NZM1 2061 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 FAM186AA6NE01 2351 aa12.32□□□□□ -0.44
RABGGTA-216ENST00000560243 GVINP1Q7Z2Y8 2422 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 CYP26A1O43174 497 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 CALCAP01258 141 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 ZDHHC11BP0C7U3 371 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 SP9P0CG40 484 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 ACO1P21399 889 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 NBL1P41271 181 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 MARSP56192 900 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 KCNH2Q12809 1159 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 PDGFRLQ15198 375 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 EML3Q32P44 896 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 DPCR1Q3MIW9 517 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 TSSK4Q6SA08 328 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 Q6ZS52 159 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 IRF2BP1Q8IU81 584 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 ARHGEF19Q8IW93 802 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 PDZD8Q8NEN9 1154 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 OSCP1Q8WVF1 389 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 WBP2Q969T9 261 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 ZFRQ96KR1 1074 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 DUSP16Q9BY84 665 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 CHRDQ9H2X0 955 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 NMUR1Q9HB89 426 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 OSER1Q9NX31 292 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 CFAP97Q9P2B7 532 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 R4GN57 208 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 FANCMQ8IYD8 2048 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 CFAP54Q96N23 3096 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 ZNF292O60281 2723 aa12.31□□□□□ -0.44
RABGGTA-216ENST00000560243 RNF225M0QZC1 329 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 TULP2O00295 520 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 PMM2O15305 246 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 NCAM2O15394 837 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 LAMTOR5O43504 91 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 GNA14O95837 355 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 TBX18O95935 607 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 MBL2P11226 248 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 TCF3P15923 654 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 PFKLP17858 780 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 TRIM21P19474 475 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 HOXC13P31276 330 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 GJA4P35212 333 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 IFNAR2P48551 515 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 PDE6CP51160 858 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 HECTD3Q5T447 861 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 SNX30Q5VWJ9 437 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 RRAGAQ7L523 313 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 TTC30AQ86WT1 665 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 PPM1KQ8N3J5 372 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 TTC39CQ8N584 583 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 MLKLQ8NB16 471 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 GPT2Q8TD30 523 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 OVCA2Q8WZ82 227 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 MSANTD3Q96H12 275 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 NT5C1BQ96P26 610 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 NUP62CLQ9H1M0 184 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 ECT2Q9H8V3 914 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 C2orf42Q9NWW7 574 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 COMMD8Q9NX08 183 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 SCML2Q9UQR0 700 aa12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.3□□□□□ -0.44
RABGGTA-216ENST00000560243 A0A1W2PQH9 124 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 PROB1E7EW31 1015 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 TLR5O60602 858 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 AFPP02771 609 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 CCDC192P0DO97 292 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 CD19P15391 556 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 MAGEA9P43362 315 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 KIF11P52732 1056 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 CSTF1Q05048 431 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 CCINQ13939 588 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 GOLGA7BQ2TAP0 167 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 ARHGAP17Q68EM7 881 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 FSTL4Q6MZW2 842 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 PKN3Q6P5Z2 889 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 ASCL5Q7RTU5 278 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 SCD5Q86SK9 330 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 CREBRFQ8IUR6 639 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 CPA6Q8N4T0 437 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 EHBP1Q8NDI1 1231 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 TFAP2BQ92481 460 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 ATP2A3Q93084 1043 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 CNOT6LQ96LI5 555 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 KREMEN1Q96MU8 473 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 ZSWIM1Q9BR11 485 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 INTS2Q9H0H0 1204 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 FBXO44Q9H4M3 255 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 NUDT5Q9UKK9 219 aa12.29□□□□□ -0.44
RABGGTA-216ENST00000560243 OTOGLQ3ZCN5 2332 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms